Sediminicoccus rosea: LHU95_11235
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Entry
LHU95_11235 CDS
T08103
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srf01002
]
LHU95_11235
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srf01011
]
LHU95_11235
Peptidases and inhibitors [BR:
srf01002
]
Cysteine peptidases
Family C82
LHU95_11235
Peptidoglycan biosynthesis and degradation proteins [BR:
srf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LHU95_11235
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UPY39234
UniProt:
A0A9E7AF18
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All DBs
Position
2409491..2410993
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AA seq
500 aa
AA seq
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MDRRDFLAGLSALAVSTGTARAQGVPANARTMVASPEAMRRLSARLMRLEEDGLDPRWYD
LNPGNQEDPATIARASAAALTDLVQGRVASMPGRVDLRRENSAATLNAWFQRIAESAEPA
EVIELAAMAPPDMDILKPALAAARVRATGAWPGFPVGGRTLEPGSFDEARVRALRARLVL
TDPVLAANPGTGASYDENLQAAVRRFQTAVGTEADGRIGLSTQAALNRSPQANVNQLRVA
MDMRRAQPVISGERRVDVNIPDYRLRMIEEGRTIIEMAVVVGRPTRATPMITTRLTSVQF
NPSWGVPQRNAKEDLLPRLRRDPTALQQRGFRIFGRVDGQVVEIDPTTVDWRAINPDRFP
YVIRQDAGDANALGRIKFIMPNADDIYMHDTPDRHYFRRADRAQSSGCIRLERPMDFLMV
MLDGMPGWERDRVDRVLATRNTSAIPLRRQVPVRLFYATVTVEGSELRVRQDIYGLDEAY
ARAMEGRVRPQGIPMAAAQG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtagagattttctggccgggttgtcggcgctcgccgtctccaccggcaccgcg
cgcgctcagggcgtccccgccaatgcccgcaccatggtcgcctcgcccgaggcgatgcgc
cggctttccgcccgcctgatgcggctggaggaagatgggctcgacccgcgctggtatgac
ctgaaccccggcaaccaggaggatccggcgaccatcgcgcgcgcctccgccgcggcactg
acggatctggtgcagggccgcgtcgccagcatgcccggccgcgtggatctgcggcgggag
aactcggccgccacgctgaacgcctggttccagcgcatcgccgaatcggccgagcccgcc
gaagtgatcgagcttgccgcgatggccccgcccgacatggacatcctcaagcccgccctg
gccgcggcccgcgtccgcgccaccggcgcctggcccggcttcccggtcggtggccgcacg
ctggaacccggcagcttcgacgaagcccgcgtgcgcgccctgcgcgcccggctggtgctg
accgaccccgtcctggccgccaatcccggcaccggcgccagctatgacgagaatctccag
gccgccgtgcgccgcttccagaccgccgtgggcaccgaggcggatggccgcatcggcctc
tccacccaggcggcgctgaaccgctcgccccaggcgaatgtgaaccagctgcgcgtcgcc
atggatatgcgccgcgcccagcccgtcatctccggcgaacggcgggtggatgtgaacatc
cccgattaccgcctgcgcatgatcgaggagggccgcaccatcatcgagatggccgtcgtc
gtcggccggccgacgcgtgccacgccgatgatcaccacgcgcctcacctcggtgcagttc
aacccctcctggggggtgccgcagcgcaacgcgaaggaggatctgctgcctcgcctgcgc
cgcgacccgacggccctgcagcagcgcggcttccgcatcttcggccgggtggatggccag
gtggtggaaatcgaccccaccacggtggattggcgcgccatcaaccccgaccgcttcccc
tatgtgatccgccaggatgcgggggatgcgaatgcgctgggccgcatcaagttcatcatg
cccaatgccgatgacatctacatgcatgacacgcccgatcggcactatttccgccgggcc
gatcgcgcgcaatcctcgggctgcatccgcctcgaacggcccatggatttcctgatggtc
atgctggacggcatgcccggctgggagcgggaccgcgtggaccgcgtgctggccacgcgc
aacacctcggccattcccttgcggcgccaggtccccgtccgtctgttctacgccaccgtc
accgtggagggcagcgagttgcgcgtgaggcaggatatctatggcctggacgaggcctat
gcgcgcgccatggaaggccgcgtgcggccccagggcatccccatggcagcggcgcagggc
tga
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