Sediminicoccus rosea: LHU95_11500
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Entry
LHU95_11500 CDS
T08103
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_11500
Enzymes [BR:
srf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LHU95_11500
DNA repair and recombination proteins [BR:
srf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LHU95_11500
Prokaryotic type
LHU95_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UPY34859
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All DBs
Position
2460927..2462099
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AA seq
390 aa
AA seq
DB search
MIVAPNRAAALARLAEFAPHMGRDYAQGRNSDGGPGARCVSALSAHLRHRLITESEVIGT
ALARHGAAAAEKFIQEVFWRSYWKGSLELRPQMWRDYRRAVELAPQPRALRTAMAGETGI
ACFDAWVRELTETGWLHNHARMWFASIWIFTLRLPWALGAEFFLQHLADADAASNTLSWR
WVAGIQTPGKHYLARAENIARFTHGRFDPRGQLNETAAPLDEAPPPAAGRLPLADPSPGG
RVGLLLHEDDLGFWPEGCEVVAVGALVSPAERSSFGLGQVARAFTAGAITDALDRAGARI
GQAPSRVALEGVARWARSGGLTRLVTPWAPVGWGRAALEDAAALCAAEGITLHRLRRPWD
EACWPLAQRGFFPFKAQIPRLIAELQPLPP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgcacccaaccgtgccgccgccctggcgcgcctcgctgaattcgccccgcat
atggggcgcgactatgcgcagggccgcaacagcgatggcggaccgggcgcgcgctgcgtc
tcggccctttcggcgcatctgcgccaccgcttgatcaccgagagcgaggtgatcggcacg
gcgctcgcgcggcacggcgcggcggcggcggagaaattcatccaggaggtgttctggcgc
agctattggaagggctcgctcgaactccggccgcagatgtggcgcgattatcgccgcgcg
gtggagctggcgccgcagccgcgcgcgctcaggacggccatggcgggtgagacgggcatc
gcctgctttgacgcctgggtgcgggaactgacggagacgggctggctgcacaaccatgcg
cggatgtggttcgccagcatctggatcttcaccctgcgcctgccctgggcgttgggcgcg
gaattcttcctccagcatctggccgatgcggatgcggcctccaacacgctctcctggcgg
tgggtggcgggcatccagacgcccggcaagcattacctggcgcgggctgagaacatcgcc
cgcttcacccatggccgcttcgacccgcgcggccagttgaacgaaacggcggccccgctg
gacgaagcgccgccccccgccgcggggcggctgcccctggccgacccatcgcccggcggc
cgcgtcggcttgctgctgcatgaggatgacctgggcttctggcccgagggctgcgaggtg
gtggccgtcggcgcgctggtctcccccgccgagcgcagcagtttcggcctcggccaggtc
gcgcgcgcattcaccgccggcgccatcaccgatgcgctggatcgcgcgggggcgcgcatc
ggccaggcgccgtcacgcgtggccctggagggcgtggcgcgttgggcgcgctcggggggg
ctgacgcggctggtcaccccctgggcgccggtcggctgggggcgggcggcgctggaagac
gcggcagcactttgcgcggccgaggggattacgctgcatcgcctccgccgcccctgggat
gaggcctgctggccgctggcacagcgtggcttcttcccgttcaaggcgcagatcccgcgc
ctcatcgccgagttgcagccgctgccgccttga
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