Sediminicoccus rosea: LHU95_11955
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Entry
LHU95_11955 CDS
T08103
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_11955
Enzymes [BR:
srf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LHU95_11955
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LHU95_11955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF6221
Motif
Other DBs
NCBI-ProteinID:
UPY34948
UniProt:
A0A9E7ADR2
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All DBs
Position
2553073..2554611
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AA seq
512 aa
AA seq
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MQPPELRLVLGDQCSASLSALEDLDPARDVVLMMEVQAECTYVPHHPQKIALILSAMRHF
ARALEARGVRVDYIRLDDPANTGSFSGEVARAVARHAPARIIATEPGEWRVLAEMESWEA
TLGLPVEIRDDTRFLADLAFFRRWSHGRKQLRVEFFYREMRRATGLLMQGDQPEGGEWNY
DAENRKPLPKGMLPPAAPRFPPDAITQEVMALVAARFPAHFGRLEGFNWPVTAAEAKRAL
AAFIAERLPRFGDFQDALAEGEATLFHSLISTSLNIGLLLPGDVCAAVEAAYRAGQVPLN
AAEGFIRQVLGWREYVRGLYWLKMPGYGATNALAAHRPLPEFFWKGDSGLRCMDAAITQT
RDLAYAHHIQRLMVTGNFALLAGLDPLAVQEWYLAVYADAFEWVELPNTHGMALHADGGV
MASKPYAASGAYLNRMGNHCARCRYDVKRAEGEGACPFNFLYWDFIARHAQDFAGNPRMA
MPLSTLRKMAPAKLAALRSEAAKFLDTVSPLP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcctgaactgagactggtgctgggcgaccagtgctccgcctcgctctcggcg
ctggaggatctcgatcccgcgcgggatgtggtgctgatgatggaggtgcaggcggaatgc
acctatgtcccgcatcacccgcagaagattgcgctgattctctcggccatgcggcatttc
gcgcgcgccctggaagcacgtggggtgcgggtggattacatccgcctggatgatccggcg
aatacgggaagcttctcgggtgaggtcgcgcgcgccgtggcccgccatgcgcccgcccgc
atcatcgcaaccgagccgggcgagtggcgcgtcctggccgagatggaaagctgggaagcc
acgctcggcctgcccgtcgaaatccgcgacgatacgcgcttcctggcggatctggccttc
ttccgccgctggtcgcatggccgcaagcaactccgcgtggagtttttctaccgcgagatg
cgccgcgcgaccggcctcctcatgcagggcgaccagccagaggggggcgagtggaattac
gacgcggaaaaccgcaagccgctgcccaagggcatgctgccgcccgccgccccccgcttc
ccgcccgatgccatcacgcaggaggtcatggcgctggtggctgcccgcttccccgcgcat
ttcggccggctggagggcttcaactggcccgtcacggcggccgaagccaagcgggccctg
gccgctttcatcgccgagcgcctgccgcgcttcggtgattttcaggacgccctggcggag
ggcgaggcgacgttgttccacagcctcatctccaccagcctcaatatcggcctgctgctg
ccgggcgatgtctgtgctgcggtcgaggccgcctaccgcgccggccaggtgccgctgaat
gccgcggagggcttcattcgccaggttctgggctggcgggaatatgtgcgcggcctctat
tggctgaagatgccgggctatggcgcgaccaacgcgctggcagcgcaccgcccgctgccg
gaattcttctggaagggcgattccggcctgcgctgcatggacgccgcgatcacccagacc
cgggacctcgcttatgcccaccacatccagcgcctgatggtgaccggcaatttcgcgctg
ctggccgggttggaccctttggcggtgcaggaatggtatctggccgtctatgccgatgcc
ttcgaatgggtggaactgcccaacacccacggcatggcgctgcatgccgatggcggcgtc
atggccagcaagccctatgcggcgagcggcgcctacctcaaccgcatgggcaatcactgc
gcgcgctgccgctacgatgtgaagcgcgcggaaggcgagggggcttgccccttcaacttt
ctctattgggatttcatcgcgcgccatgcgcaggatttcgccggaaatccacgcatggcc
atgccgctgagcaccctgcgcaagatggcgccggccaagcttgcggccttgcggtccgag
gccgcgaaattcctggacactgtgtcacccttgccttga
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