Sediminicoccus rosea: LHU95_11975
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Entry
LHU95_11975 CDS
T08103
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_11975
Enzymes [BR:
srf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LHU95_11975
DNA repair and recombination proteins [BR:
srf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LHU95_11975
Prokaryotic type
LHU95_11975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPY34952
LinkDB
All DBs
Position
complement(2558005..2559414)
Genome browser
AA seq
469 aa
AA seq
DB search
MTAPALFWFRQDLRLTDNPGLDALGGRPCLLVYVLDDQAAGRWAHGGAQRWWLHHSLAAL
DADLCARGAALHIARGPAARIIPELAEAIGASEVMAGRLYEPWARERDAAIAQTLKAAGR
GFTLHSTSLLHEPHRIRTGTGKPYSVYTPFSRALFALGEPPPPLPAPARLAGIAHPGLPL
DALALLPKGDWAAEFPAHWSPGEAGAAQRIAKFTAITRYDATRNLPGIPGTSGLSPHLRF
GEISPRQVWHAARAAGVAGDATFLKEILWREFAYHLLWHRPDMPETPLQEVFARFPWQPD
AGHLRAWQRGMTGYPIVDAGMRQLWRSGWMHNRVRMITASFLVKHLLQPWQAGEDWFWDT
LVDGDLASNAASWQWVAGCGADAAPYFRIFAPVLQGEKFDTDGAYVRRWVPELARLPDRF
LHKPWEAPDIILRGAGIRLGTDYPYPIIAHGEGRARALAAYAAMRGEAA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcccgcgcttttctggttccgacaggaccttcgcctcaccgacaaccctggc
ctcgatgctcttggcgggcgcccttgcctgctggtctatgtccttgacgaccaggccgcc
ggccgctgggcgcatggcggcgcgcagcgctggtggctgcatcattcgctggcggccctc
gatgccgatctgtgcgcgcggggcgcggcgctgcacatcgcgcgcgggccggccgcacgc
atcatccccgaactggccgaggcgatcggtgcgagcgaggtgatggccgggcgcctctat
gagccatgggcgcgcgagcgagatgccgccatcgcgcagaccctgaaggcggctggccgg
ggcttcaccctgcacagcaccagcctgctgcatgagccgcatcgcatccgcaccggcacg
ggcaagccctattccgtctacacgccgttctcgcgcgcgcttttcgccctgggcgagccc
ccgccgccgctgcccgcccctgcccgcctcgccggcatcgcgcatcctggcctgccgctg
gatgcgctggcattgcttcccaaaggcgactgggcggcggaattcccggcgcattggtcc
cctggcgaggcgggggccgcacagcgcatcgcgaagttcaccgccatcacgcggtatgat
gccacgcgcaacctgccgggcattccgggcacctccggcctgagcccgcatctgcgcttc
ggcgagatcagcccgaggcaggtgtggcacgcggcgcgcgcggcgggtgttgcgggtgat
gcgaccttcctgaaggaaatcctctggcgggaattcgcctatcacctcctgtggcaccgg
ccggatatgcctgagacgccgttgcaggaagtcttcgcccgcttcccctggcagcccgat
gcaggccatctgcgcgcctggcaacgcgggatgacgggctatcccatcgtggatgccggc
atgcgtcagctctggcgcagcggctggatgcacaaccgcgtgcggatgatcaccgcttcc
ttcctggtgaagcatctgctgcagccctggcaggctggcgaggactggttctgggacacg
ctggtggatggggacctcgcctccaacgcggcctcctggcaatgggtggcaggctgcggc
gccgatgccgcgccctatttccgcatcttcgcccccgtcctccagggcgagaagttcgac
accgatggcgcctatgtccgccgctgggtgcctgagcttgcacgcctgccggacaggttc
ctgcacaagccctgggaagcgcccgatatcatcctgcgcggcgccggcatccggcttggc
acggattatccatacccgatcatcgcgcatggcgaaggccgcgcccgagccctggccgcc
tatgccgcgatgcgcggcgaggcggcatga
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integrated database retrieval system
