KEGG   Sediminicoccus rosea: LHU95_11990
Entry
LHU95_11990       CDS       T08103                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
srf  Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:srf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srf03400]
    LHU95_11990
Enzymes [BR:srf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LHU95_11990
    5.6.2.6  RNA 3'-5' helicase
     LHU95_11990
DNA repair and recombination proteins [BR:srf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LHU95_11990
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: UPY34955
UniProt: A0A9E7A2W2
LinkDB
Position
complement(2560813..2563296)
AA seq 827 aa
MPELFTSWFAGRGWAPRTHQLDMLAAARAGQSALLIAPTGGGKTLAGFLPSLIALHDAPR
EGLHTLYISPLKALAVDIARNLEAPITEMGLAIRVETRTGDTPANRRARQREKPPNILLT
TPESLTLLLSLADAHTLFGDVEAVVVDEAHALAGTKRGDQLSLALSRISALAPRARRIGL
SATVNHPEALRAWLSPTARAEDVALIRADAGAAPLLGVQLPAGRLPWGGHMGLASAPEIL
ARIAAARVTIVFVNTRAQAELIFAALWKLNEDALPIAVHHGSLTVEQRRRVEAAMADGRL
RGVVATSSLDLGIDWGDVDQVIQVGAPKGVSRLLQRVGRANHRMDEASAALLVPANRFEV
IECAAALESIAAGELDGEPPRPGGLDVLAQHILAMACHAPFRPDDLYAEVTRSGAYAELS
RRDFDDVLRFVEDGGYALASYERWRRLFRDSEGLVHVRGTAIARQLRLNLGTIVELPLMK
VKLRGGPMLGEVEEWFISTLTPGDTFRFAGQILRYEGMAGVTAEVSRGGEGEPRVPAYGG
SRMPLSTHLAERVRGILSDPTHWAMLPESVREWLRMQRLKSELPSATGLLVESFPRGGKW
FLIAYCFEGRLAHQTLGMLATRRMERLGWGPLGFVATDYVLACWTAFEPGDPGDLFVEDL
LGEDLEDWIAESSMLRRTFRNIATIAGLLEKHHPGIEKNRKQMSVNSDLIYDVLRKHEPD
HILLRATRAEAAYGLTDVRRIGTMLARAKGQIRHRRLEHVSPLAVPALLEVGREWVAGDA
EDALLAEAASLVSDATDGAESYFETVSDLAEEAAPRPPRPRERRRRR
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgccagaactatttaccagctggtttgccgggcggggctgggcgccacggacgcatcag
ctcgacatgctggccgccgcgcgggcggggcaatccgcgttgctcatcgcccccaccggc
ggcggcaagacgctggcggggttcctgccctcgctcatcgcgctgcacgacgccccgcgt
gaggggctgcacaccctatacatttcgccgctgaaggcgctggccgtggatatcgcgcgc
aatctggaggcgccgatcaccgagatgggcctggccattcgcgtcgagacccgcaccggt
gatacgcccgccaatcgccgtgcccgccagcgcgaaaagccacccaatatcctgctgaca
acgcccgagagcctgacgctgctgctctccctggccgatgcccatacgcttttcggagat
gtcgaggcggtggttgtagatgaggcacatgccctggccgggaccaagcggggcgaccag
ttgtcgctggcgctgtcgcgcatctcggccctggcgccacgcgcgcgccgcatcgggctt
tccgccacggtgaaccaccccgaggcgctgcgcgcatggctctcgcccacggcacgtgcg
gaggatgtggcgctgatccgtgccgatgcgggggcggctcccttgcttggcgtgcaattg
ccggccggccggctgccctggggcgggcatatgggcctggcttccgcgccggaaatcctg
gcgcgcatcgcggccgcgcgcgtcaccatcgtcttcgtcaacacgcgtgcccaggctgaa
ctcatcttcgccgccctgtggaagctgaacgaggatgctctgcccatcgccgtgcatcac
ggcagcctgaccgtcgagcagcgccgccgcgtggaagccgcgatggcggatggcaggctg
cgcggcgtggtcgccacctcctcgctcgatctgggcattgactggggcgatgtggaccag
gtgattcaggtgggcgcgcccaagggtgtctcccgcctgttgcagcgtgtcggccgcgcc
aatcaccgcatggatgaggccagtgcggcgttgctcgtccccgccaatcgcttcgaggtg
atcgaatgcgccgccgccctggagagcatcgccgccggagaactggatggcgagccgccg
cgcccgggcggcctcgatgtgctggcgcagcatatcctggccatggcctgccacgcgccc
ttccgcccggatgatctctatgccgaggtgacgcggtctggcgcctatgccgaactctcc
cggcgcgatttcgacgatgtgctgcgcttcgtcgaggatggcggctatgcgctggccagc
tacgagcgctggcgccgcctgttccgcgattccgaagggctcgtgcacgtacgcggcacc
gccatcgcgcggcaattgcgcctcaacctcggcaccatcgtggagctgccgctgatgaag
gtgaagctgcgcggcgggcccatgctgggcgaggtggaggaatggttcatctccaccctc
acccccggggataccttccgcttcgccggccagatcctgcgctacgagggcatggcgggt
gtcacggccgaggtctcgcgcggcggcgagggtgagccgcgggtgccggcctatggtggt
tcgcgcatgccgctctccacccatctggcggagcgtgtgcgcggcatcctcagcgacccc
acccattgggccatgctgcccgagagtgtccgggaatggctgcggatgcagcgcctgaaa
agcgaattgcccagtgccaccggcctgctggtcgagagcttcccgcggggcggcaaatgg
tttctgatcgcctattgcttcgaggggcgcctcgcgcaccagacccttggcatgctcgca
acacggcgcatggagcggctgggctggggcccgctgggcttcgtcgcgactgattacgtc
ctcgcctgctggaccgccttcgagcctggcgaccctggcgacctcttcgtcgaggatctg
ctgggcgaggatctggaggactggatcgcggaaagctccatgctccgccgcaccttccgc
aacatcgcgaccatcgcggggctgctggaaaagcatcatccgggcatcgagaagaaccgc
aagcagatgagcgtgaactccgacctgatctatgacgtgctgcgcaagcatgagccggac
cacatcctgctgcgcgcaacgcgcgccgaggccgcctatggcctgaccgatgtgcgccgc
atcggcaccatgctggcccgcgccaaggggcagatccggcaccggcggctggagcatgtc
tccccgcttgccgtgccagcgctgctggaagtcggccgcgaatgggtggcgggcgatgcc
gaggacgcccttctggcggaggcggcgagcctcgtttccgacgccacggatggcgcggag
agctatttcgagaccgtgtccgacctcgccgaggaagcggcaccccgcccgccccgcccc
cgcgaaagaaggcgccgccgatga

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