KEGG   Sediminicoccus rosea: LHU95_12695
Entry
LHU95_12695       CDS       T08103                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
srf  Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:srf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:srf03000]
    LHU95_12695
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:srf02048]
    LHU95_12695
Transcription factors [BR:srf03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    LHU95_12695
Prokaryotic defense system [BR:srf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    LHU95_12695
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 Peptidase_M78 HTH_37 HTH_19 YdaS_toxin HTH_23 HTH_Crp_2 Sigma70_r4 HTH_8 IMS_HHH
Other DBs
NCBI-ProteinID: UPY35093
UniProt: A0A9E7A344
LinkDB
Position
2702205..2703413
AA seq 402 aa
MDSGWSSGRHVRKRRQPALIGNGSLQSRSCLLGITMTETAFAPDWVSPPGETIADVLDER
GWTQAELADRLGFTRKHVNDLIQGRSAMTPDAAERLATVLGSTIGFWLRREAQYRAAQEA
LRAREERKAQTEWLGELPLRDMVGFGWVPKVKDRVDQLSECLRFFGVASVDAWRQHYATP
AAAFRAAKSQSMTVGAVAAWLRQGERAAEALACRPFNEASFRAILGEFRALTTEPPERFV
DALVSRSAACGVAVVFAPAPKGCPASGATRWLAPDRALLMLSLRYRTNDHLWFTFFHEAA
HILLHGKRMQFIEGVEPLDPNSEIEADAFARDWLVPPAQARKLQALAKEGVVSATRVTAL
AKEIGVAPGIVVGRMQKEKWLPWTHLNGLKVSYTWAKDRSAA
NT seq 1209 nt   +upstreamnt  +downstreamnt
gtggacagcggttggtcttccgggcggcacgtcaggaagcgtcgacaaccggcgctgatt
ggaaacgggtcactgcaatcgagatcgtgtttattggggattaccatgactgagaccgcc
ttcgccccggactgggtctcccctcctggtgagaccatcgccgatgtcctcgacgagcgc
ggttggacgcaggctgagctggcagatcgactgggcttcacgcgcaagcacgtcaacgac
cttatccagggccgttcggccatgacgccggacgcagcagagcgtctggctactgtgctc
ggttcgaccatagggttctggctccggagggaggcgcagtatcgcgcggcccaggaagcg
cttcgggctcgtgaagaacggaaggcacagacggagtggctcggtgagttgccgctgcgc
gacatggtcggcttcggttgggtgccgaaggtcaaggaccgggtggaccaactgtccgag
tgcctgcgcttctttggggtggcgtctgtcgatgcgtggcgacagcattacgcaacgccg
gctgcagcgtttcgtgcggccaaatcgcaatccatgaccgtcggggctgtggccgcatgg
ttgcggcagggggagcgggcagcagaggcgctggcctgccggccattcaacgaagcgagc
tttcgagctattcttggtgagtttcgcgcgctgacgaccgaaccgcccgaacgcttcgtt
gatgcattggtcagccgctctgctgcctgcggtgtcgcggtggtcttcgcgccagcacca
aagggctgtcccgcgagtggcgcgacgcgttggctggcgcccgatagggctttgctgatg
ctgagcctccgctatcgcacaaatgaccatctctggttcacgttctttcacgaggctgct
cacatcctgctgcacggcaagcggatgcagttcatcgagggtgtcgagccgctagatccg
aatagtgaaatcgaagctgatgcctttgcgagagattggctcgtgcctccggctcaggct
cgcaagctgcaggcgcttgcaaaagaaggcgttgtatcggctacgcgagtgacggcgctt
gccaaggaaatcggcgtcgcgccggggatagttgtggggcggatgcaaaaagagaagtgg
cttccttggacccacctcaacgggctcaaggtatcgtatacctgggcgaaagaccgttca
gctgcctga

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