KEGG   Sediminicoccus rosea: LHU95_12730
Entry
LHU95_12730       CDS       T08103                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
srf  Sediminicoccus rosea
Pathway
srf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:srf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LHU95_12730
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:srf02000]
    LHU95_12730
Transporters [BR:srf02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    LHU95_12730
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_22 AAA_30 AAA_16 AAA_5 AAA Mg_chelatase Rad17 RsgA_GTPase nSTAND1 NACHT AAA_25 nSTAND_NTPase5 ATPase_2 NPHP3_N NB-ARC AAA_29 TsaE AAA_19 AAA_14 ORC-CDC6-like AAA_28 MobB Aft1_HRA
Other DBs
NCBI-ProteinID: UPY35100
LinkDB
Position
complement(2710121..2711206)
AA seq 361 aa
MELGHRLDMDGVRVRYGQTLAVRDVTLSVAPGEILALLGPSGCGKTTLLRTVAGFIQAEA
GQVLVDGRAIDGLPPGKRGVGIVFQSYALFPHMTAAQNVAYGLEARGMPKAEIIRRVESA
LAAVRMESFGARRPAALSGGQQQRVALARALAIEPAILLLDEPFAALDRSLRLDLQLEIK
RIQRRFGVTCVLVTHDQDEAMSMADRMAVMRSGVVEQVGPPTELYDNPATAFVAGFVGTT
NRLHGRIEAREGAGYAVRLDAGATVHVESPRGFALAERVMLCARPEQLTLLPVEDTRPDA
FPARLRLSLPLGPALIHDLEAGSAEVKIQQPRHGAPPPPGPVRIAILPGATPSLFPEGDS
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaattgggccatcgcctcgacatggacggcgtgcgggtgcgctacggccagacgctg
gcggtgcgcgatgtgacgctgagcgtggcgccgggcgaaatcctggcgctgctcggcccc
tcgggctgcggcaagacgacgctgctgcgcacggtcgcgggcttcatccaggccgaggcg
ggccaggttctggtggatggccgcgcgattgacggtctgccacccggcaagcgcggcgtg
ggcattgtgtttcaatcctatgcgctgtttccgcacatgaccgccgcgcagaatgtggcc
tatgggctggaagcgcgcggcatgcccaaggccgagatcatccgccgcgtggaatcggca
ctggccgccgtgcggatggaaagcttcggcgcgcggcgcccggccgccctgtcgggtggt
cagcaacagcgtgtggccctggcccgcgccctggcgatcgagcccgccatcctgctgctg
gatgagcccttcgccgcgctcgaccgttcgctgcggctggatctgcaactggagatcaag
cgcatccagcgccgcttcggcgtcacctgcgtactggtcacgcatgaccaggatgaggcg
atgagcatggcggaccgcatggccgtgatgcgctctggcgtggtggagcaggtcggcccg
cccacggaactttacgacaacccggccaccgccttcgtcgccggcttcgtcggcaccacc
aaccggctgcacgggcggatcgaggcgcgggagggtgcgggctatgccgtgcggcttgat
gccggcgccacggtccatgtggaaagcccgcgcggcttcgcgctggccgagcgggtgatg
ctttgcgcgcggcccgagcagctcaccttgctgccggtcgaggatacccggccggacgct
tttcctgcccggctgcggctttccctgccgctgggccccgccttgatccatgacctggag
gcaggctcggcggaggtgaagatccagcagccgcgccatggcgcgccgccaccacctggc
cccgttcgcatcgccatcctgcccggcgccacgccgagcctgttccctgaaggagattcc
gcatga

DBGET integrated database retrieval system