Sediminicoccus rosea: LHU95_14290
Help
Entry
LHU95_14290 CDS
T08103
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
srf
Sediminicoccus rosea
Pathway
srf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHU95_14290 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_14290 (xth)
Enzymes [BR:
srf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LHU95_14290 (xth)
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LHU95_14290 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UPY35388
UniProt:
A0A9E7D0Q5
LinkDB
All DBs
Position
3038915..3039685
Genome browser
AA seq
256 aa
AA seq
DB search
MRLASFNVNSIRRRVPHLARFLARHEPDLVFLQELKCKTEEFPALELAGTGYRIHAVGQP
GGRNGVAVLGRVDFDILNEALPGEPEDSHARFLAVRAGGMVAAGIYLPNGNSGGAEGMAY
KWRWMDRLRLWAAAHLDAFTPLAILGDFNVCPTERDLASGALPPLDALVHPESRARWRAM
EHLGLTDALRALHPQDAPYTYWDYGAAFETNRGLRIDHALLSAELAERLALCGVDVAARA
EDQPSDHAPVWLDLAD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgccagcttcaatgtgaattcgatccgccgccgggtgccgcatctggcgcgc
ttcctcgcgcggcatgagccggacctcgtcttcctgcaggaattgaagtgcaagacggag
gaattcccggcccttgaactggccggcaccggctaccgcatccatgccgtcggccagccg
ggcgggcgcaatggcgtggcggtgctgggccgcgtcgatttcgacatcctgaacgaagcc
ctgcccggcgagccggaggacagccatgcccgattcctggcggtgcgggccggcgggatg
gtggccgcgggcatctacctccccaacggcaatagcggcggcgccgagggcatggcctat
aaatggcgctggatggaccggctgcgcctctgggccgcggcgcatctggacgccttcacg
ccgcttgccatcctcggcgatttcaatgtctgcccgaccgagcgggacctcgcatccggc
gccctgccgccgctggatgcgctggtgcatcctgaaagccgcgcccgctggcgtgccatg
gaacatctgggcctgaccgatgcgctgcgcgcgctgcacccgcaggacgcgccctacacc
tattgggattatggcgcggccttcgagaccaatcgcggcttgcggattgaccatgcgctg
ctctcggcggaactggccgagcggctggcgctgtgcggcgtggatgtcgcggcgcgggcg
gaggaccagccctcggatcacgcgccggtctggctggacctcgcggactga
DBGET
integrated database retrieval system
