Sediminicoccus rosea: LHU95_15745
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Entry
LHU95_15745 CDS
T08103
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srf03016
]
LHU95_15745 (rnd)
Enzymes [BR:
srf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LHU95_15745 (rnd)
Transfer RNA biogenesis [BR:
srf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LHU95_15745 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UPY35671
UniProt:
A0A9E7D8J0
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All DBs
Position
complement(3318729..3319922)
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AA seq
397 aa
AA seq
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MAPAQYATDATLTPRLITQSSDLAELCERLRREPFVTVDTEFMRERTYWPELCVVQLAGA
DEVAVVDAEAPGMDLAPLGDLLADPAVVKVFHAARQDVEIFLLKFGAVPTPMFDTQIAAM
VAGFGDQASYDSLVRALAGASIDKAHRFSDWSARPLSQAQIIYAAGDVTYLRQVYLRLRE
KLLAEGRLDWVAQEMDALLEPSTYITEPAVAWERLKPKTGNRRFLGVLRAAAAWREAEAQ
RINIPRGRLVKDETLLEVAATAPETADQLARARGISEGFARGKSGVALLAAIAEAKALPE
DQLPMPLEARRGAGASPALVALLKVLLAASAEAHHVAPKLLADTEDLERLASESEPDIRA
LSGWRREVFGEDALALKTGQLALGVAGRRVRLIRTEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgctcaatacgcgacagacgcaaccctgaccccgcgtctgattacccaatcc
tccgatctggcggaactctgcgaaaggctccgccgcgagcccttcgtgaccgtggacacc
gagttcatgcgtgagcgcacctattggccggagctttgcgtcgtgcagttggccggggcg
gatgaggtggccgtggtggatgccgaggcgccgggcatggacctcgccccgctgggcgat
ctcctggccgatccggccgtggtgaaggtgttccacgccgcccgacaggatgtggaaatc
ttcctgctgaaattcggcgctgtccctaccccgatgttcgacacgcagatcgccgccatg
gtggccggcttcggcgaccaggcgagctatgacagcttggtgcgcgcgctggcgggcgct
tcgattgacaaggcgcatcggttttccgactggtccgcccgcccgctgtcccaggcgcag
atcatctatgcggcgggggacgtgacctatctgcgccaggtctatctgcgcctgcgcgag
aagctgctggcggaagggcggctcgattgggtggcgcaggaaatggacgcgctgctggag
ccctccacctatatcaccgaacccgccgttgcctgggagcggctgaagcccaagaccggc
aatcgccgcttcctgggcgtactgcgtgccgccgccgcctggcgcgaggcggaggcccag
cgcatcaacatcccgcgcggccggctggtgaaggatgaaaccctgctggaagtggcggcc
accgcccctgaaaccgcggaccagctggcccgcgcgcgggggatttcggaaggctttgcg
cgcggcaaatcgggcgtcgccctgctcgccgccatcgccgaggccaaggccctgccagag
gaccaactccccatgccgctggaagcccggcgcggggccggcgcctcgccagcgctggtc
gcgctgttgaaggtactgttggcggcgagtgcggaggcgcatcacgtcgcccccaagctg
ctggccgataccgaggatctggagcggctggccagcgagagcgagccggatatccgcgct
ctcagcggctggcggcgggaagtgtttggcgaggatgctctggcgctgaagacggggcag
ttggcgctgggcgtggccgggcggcgggtgcggctgatccgtacggaggggtaa
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