Sediminicoccus rosea: LHU95_16965
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Entry
LHU95_16965 CDS
T08103
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00300
Lysine biosynthesis
srf01100
Metabolic pathways
srf01120
Microbial metabolism in diverse environments
srf01230
Biosynthesis of amino acids
Module
srf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHU95_16965 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srf01002
]
LHU95_16965 (dapE)
Enzymes [BR:
srf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LHU95_16965 (dapE)
Peptidases and inhibitors [BR:
srf01002
]
Metallo peptidases
Family M20
LHU95_16965 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UPY35897
UniProt:
A0A9E7CZQ7
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Position
complement(3589850..3590983)
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AA seq
377 aa
AA seq
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MTAAADPIPLAQALIRCRSVTPADDGALDVMEAALRPLGFTCTRLRFNEVDNLFARRGTG
APHFCYAGHTDVVPPGDEAAWADNPFAAVIRDGVLYGRGACDMKGGIAAFVAGLTDYLAA
HPDHPGSLSLLITGDEEGPSVDGTRRVLEWMAAHGHTPDICVVGEPTSKAALGDTIKIGR
RGSMNAWITIQGRQGHSAYPQLADNPVHRLIRVLDALTATPLDAGSTWFEASTLQVTGIQ
VDNSATNVIPAQASAFLNIRFNELHTSEALTAHLRDVLAEHAPDHSLRVQVSGESFLTQP
GPFVEALSRAVQRSTGLTPKLDTGGGTSDARFITRHCPVAELGAVGASLHQRDESAPVEE
LRALAGLYRAVIEECLR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcggctgatccgatcccccttgcgcaggcgctgatccgctgccgcagcgtg
acgccggccgatgatggcgcgctggatgtgatggaggccgcactccgtccgctcggcttc
acctgcacgcggctgcgtttcaacgaggtggacaacctctttgcccgacgcggcaccggc
gcgccgcatttctgctacgccggccacaccgatgtggtcccgcccggcgatgaggccgcc
tgggccgacaaccccttcgccgccgtgatccgcgatggcgtgctctatggccgcggcgcc
tgcgacatgaagggcggcatcgccgccttcgtggccggcctgaccgactacctggccgcc
catccggatcaccctggatcgctctcgctgctcatcaccggtgatgaggaggggccttcc
gtggatggcacgcgccgcgtgctggaatggatggccgcgcacggccacacgccggatatc
tgcgtggtgggcgagccgacgtcgaaggcagcgctgggcgataccatcaagatcggccgg
cgcggcagcatgaatgcctggatcaccatccagggccgccagggccacagcgcctatccg
caactggccgataacccggtgcatcgcctgatccgcgtgctggatgcgctgaccgcgaca
ccgctcgatgcgggcagcacctggttcgaagcctcgacgctgcaggtcaccggcatccag
gtggataattccgcgaccaacgtgatcccggcgcaagccagcgccttcctgaacatccgc
ttcaacgagctgcacacctcggaagcccttaccgcgcatctgcgcgacgtgctggccgaa
cacgcgccggatcacagcctgcgcgtccaggtctcgggcgagagcttccttacccagccc
ggtcccttcgtcgaggcgctgagccgcgcggtgcagcgcagcacggggctgacgcccaag
ctcgatacgggtggcggaacctcggatgcgcggttcatcacccgccattgcccggtggcc
gaactcggcgccgtgggggccagcctgcaccagcgcgatgaatcggcgccggtcgaggaa
ttgcgtgcattggccgggctctaccgtgccgtcatcgaggagtgcctccgctga
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