Sediminicoccus rosea: LHU95_17070
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Entry
LHU95_17070 CDS
T08103
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srf03032
]
LHU95_17070 (gyrA)
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_17070 (gyrA)
Enzymes [BR:
srf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LHU95_17070 (gyrA)
DNA replication proteins [BR:
srf03032
]
Prokaryotic type
DNA Topoisomerases
LHU95_17070 (gyrA)
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LHU95_17070 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UPY35916
UniProt:
A0A9E7A549
LinkDB
All DBs
Position
complement(3608580..3611309)
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AA seq
909 aa
AA seq
DB search
MSDEIPKPLDVAPIALEEEMRRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFAMHEAGY
TPDKPHRKSARVVGDVMGKYHPHGDSAIYDAMVRMAQGFSMRVPLVDGQGNFGSMDGDPP
AAMRYTEVRLAKAAGALLEGIDEDTVDFTPNYDESANEPRVLPAAFPNLLVNGAGGIAVG
MATNIPPHNPTEVIDATLKLVAEPETTLEELMAIIPGPDFPTGGIILGRAGIRSAFEMGR
GSIPLRADCVIEEMKGQRQAIIVNEIPYQVNKSVLIERIAELVRSKLIEGITDLRDESDR
SGLRIVIELKREAVAEVVLNQLYRMTSLQISFPVNFLALNGGRPQQMGIRDALLAFIAFR
EEVILRRSRHRLMKARERAHNLVGLAIAVANIDAVIRLIRESADAASARVALMARDWPAA
DVAPLVALVQDEGNELSPEGTMRLTEAQARGILELRLQRLTGLEREKIDAELKEVGARIV
ELLEILSSRPRRMEVMTEELLAVRATLHSPRLTRIVDYAADIDDESLIAPASMIVTLTRD
GYVKRTPLDVFRSQHRGGRGRSAASTRADDVVVRSFVGHTHQWVLFFTSRGIAFREKVWQ
LPEGGTGGKGRSLRQVLQLQENETVTAVLPLPQDESLWEHLHLVFATSDGNVRRNRLSDF
RNVRSSGLIAMKLDEGDSLIGVATCREGDDVLLATRMGKAIRFVADADTLRVFSGRDSTG
VRGIRLGKGDAVIALAVLGHVVASVEERTAYLKQKRRGEGAEEGEAPIADDAEEAGTQDI
TLSAERLAELEAAEQFLLTVTDRGFGKRSSAYEYRVTGRGGQGINGITLSRRTGAAVVAS
FTVQAGDHIMLMTDGGQAIRFEAEQVRQTGRQSQGVMLQRLDDAERVTSCFPVLEDDAED
APAEGEDNG
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacgaaatccccaagcccctggacgtggcccccatcgccctcgaagaggagatg
cgccgctcctacctcgactacgcgatgtccgtcatcgtcagccgcgcgctgcccgatgtg
cgcgatggcctgaagccggtgcatcgccgcatcctgtttgccatgcatgaggccggctac
acgccggacaagccgcaccgcaaatcggcccgcgtggtgggtgacgtgatgggcaagtat
catccgcacggggacagcgcgatctatgacgccatggtgcgcatggcgcagggcttctcg
atgcgcgtgccgctggtggatggccagggcaatttcggctcgatggatggcgacccgccg
gcggccatgcgctacaccgaggtccgcctcgccaaggccgccggcgcgctgctggagggc
attgacgaagacacggtggatttcacgccgaactacgacgaaagcgccaatgagccgcgc
gtcctgccggccgccttcccgaatttgctggtgaatggcgcgggcggcatcgccgtcggc
atggcgaccaacatcccgccgcacaacccgaccgaggtgattgacgccacgctcaagctg
gtggccgagccagagacgacgctcgaagagctgatggccatcatccccggcccggatttc
ccgacgggtggcatcatcctcggccgtgccggcatccgctcggccttcgagatggggcgc
ggctccatcccgctgcgcgccgattgcgtgatcgaggagatgaagggccagcgccaggcc
atcatcgtcaacgaaatcccctaccaggtgaacaagtcggtcctgatcgagcgcatcgcc
gaactggtgcgctccaagctgatcgaaggcatcaccgacctgcgcgatgagagtgaccgc
tcgggcctgcgcatcgtgatcgagctgaagcgcgaagccgtggcggaggtggtgctgaac
cagctctaccggatgacctcgctgcagatcagcttcccggtgaatttcctggcactcaac
ggcggccgcccgcagcagatgggcatccgtgacgcgctgctggccttcatcgccttccgc
gaggaggtgatcctccgccgctcgcgccatcggctcatgaaggcgcgggaacgcgcgcac
aacctggtgggcctcgccatcgcggtcgccaatatcgacgcggtgatccgcctgatccgc
gagagtgcggatgcggcctcggcccgcgtggcgctgatggcgcgggactggccggcggcc
gatgtcgcccccctggtggcgctggtgcaggatgagggcaatgagctctcgcccgaaggc
accatgcgcctgacggaagcccaggcgcgcggcatcctggaactgcgcctgcaacgcctg
accgggcttgagcgcgagaagatcgacgcggaactcaaggaagtcggtgcccgcatcgtg
gaactgctggaaatcctctccagccgcccgcgccgcatggaggtgatgaccgaggagttg
ctcgccgttcgcgccacgctgcattcgccgcggctgacgcggatcgtggattacgcggcc
gatattgacgatgagagcctgatcgcgccggcctcgatgatcgtgacgctgacgcgcgat
ggctatgtgaagcgcacgccgctcgatgtgttccgctcgcagcatcgcggtgggcgcggg
cgcagtgccgcctcgacgcgcgccgatgatgtggtggtgcgcagcttcgttggccacacg
caccaatgggtgctgttcttcaccagccgcggcatcgccttccgcgagaaggtctggcag
ctgcccgagggcggcaccggcggcaaggggcgttccctgcgccaggtgctgcaactgcag
gagaacgagacggtcacggccgtgctgcctctgccgcaggatgagagcctgtgggagcat
ctgcacctcgtcttcgccaccagtgacggcaatgtgcgccgcaaccggctctctgacttc
cgcaatgtgcgctcctccggcctcatcgccatgaagctggatgagggcgattcgctgatc
ggcgtggccacctgccgcgaaggcgatgacgtactgctggcaacgcgcatgggcaaggcg
atccgcttcgtcgcggatgcggatacgttgcgcgtcttttcgggccgcgattcgaccggg
gtgcgcggcatccggctgggcaagggggatgcggtgatcgcgctcgccgtgctcggccat
gtcgttgcctcggtggaggaacgcacggcctatctcaagcagaagcgccgcggcgaaggc
gccgaggagggtgaggcccccatcgctgatgacgccgaggaggccggcacgcaggacatc
acgctcagcgccgagcgcctggcggagctggaagcggcggagcaattcctgctcaccgtg
acggatcgcggcttcggcaagcgcagcagcgcctacgaataccgcgtcaccgggcgtggc
gggcagggcatcaacggcatcacgctcagtcgccgaacgggcgcggccgtggtggcaagc
ttcaccgtgcaggcgggggatcacatcatgctgatgaccgatggcggccaggccatccgc
ttcgaggccgagcaggtgcgccaaacggggcggcaatcccagggcgtcatgctgcaacgc
ctggacgatgcggagcgcgtgaccagctgcttccccgtcctcgaggatgatgccgaggat
gcgcccgcggagggcgaagacaatggttga
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