Sediminicoccus rosea: LHU95_17705
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Entry
LHU95_17705 CDS
T08103
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srf
Sediminicoccus rosea
Pathway
srf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHU95_17705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srf03021
]
LHU95_17705
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_17705
Enzymes [BR:
srf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LHU95_17705
Transcription machinery [BR:
srf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHU95_17705
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHU95_17705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
UPY36036
LinkDB
All DBs
Position
complement(3738828..3739844)
Genome browser
AA seq
338 aa
AA seq
DB search
MLERNWQSLIKPEKLQVESGSTDLRQATLVAEPLERGFGQTLGNALRRILLSSLQGAAVT
GVKIDGVLHEFSSLTGAREDVTDIILNLKQLAIRYNGDTTKRLMLTATGPGEVTAAMIQT
TGDIEIANPELVICTLDDGAKMSMELTVQVGRGYVPASMNRAEDAPIGMIPVDAIYSPVR
KVSYRVEPTRVGQVTDYDRLVLSLETNGTIVPEDAVALAARILQDQLSLFVTFEEPREKM
RDEVEDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRKS
LNEIKEVLASMGLSLGMPIIGWPPENIEDLAKKIEEPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaacgcaactggcaatccctgatcaagcccgagaagctccaggtcgagtcgggc
agcaccgatctgcgccaggcaaccctggtggccgagccgctggagcgtggctttggccag
acgctgggcaatgcgctgcgccgcatcctgctctcctcgctgcagggtgccgccgtgacc
ggcgtgaagattgacggcgtgctgcatgaattcagcagcctgaccggcgcgcgtgaggat
gtgacggacatcatcctcaacctcaagcagctggccatccgctacaatggcgacacgacg
aagcggctgatgctgacggcgaccggccccggcgaagtcaccgccgcgatgatccagacg
acgggcgatatcgaaatcgccaatccggagctggtcatctgcacgctggatgacggtgcc
aagatgtccatggagctgacggtccaggtcggccgtggctacgtgcccgcttcgatgaac
cgcgccgaggatgcgccgatcggcatgatcccggtggatgcgatctattcgcccgtccgc
aaggtgtcctaccgcgtcgagccgacccgcgtcggccaggtgacggattatgaccgcctc
gtgctctcgctcgagaccaacggcacgatcgtgccggaggacgccgtggcgctcgccgcc
cgcatcctgcaggaccagctctcgctcttcgtcaccttcgaggagccgcgcgagaagatg
cgcgacgaggtggaggacgaccttcccttcaaccgcaacctgctgcgcaaggtggatgag
ctggagctctccgtccgttcggcgaattgcctgaagaacgacaacatcgtctatatcggc
gacctggtgcagaagtccgagcaggaaatgctgcggacgccgaatttcggccgcaagtcg
ctgaacgagatcaaggaagtgctggcctcgatgggcctctcgctgggcatgccgatcatc
ggctggccgcccgagaacatcgaggatctggcgaagaagatcgaagagccgttctaa
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