Sediminicoccus rosea: LHU95_18925
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Entry
LHU95_18925 CDS
T08103
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_18925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_18925
Transporters [BR:
srf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LHU95_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UPY36270
LinkDB
All DBs
Position
3990707..3991744
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AA seq
345 aa
AA seq
DB search
MILASRRTLLTAAALCAPWVTSRAQSAGTLTVVLNQGLLARLWIDELHPVFERETGARLN
VQQSVTGNMLGMLRTQRDNPPDLMQFSEAGVFSAAQAGLLRAHNPANIPNWASLRDAFKL
ADNYSAGVIDAVHTLYFNTRAQTTQPTSWAQLWDASSRRRVAIPPITWNSGVRMVTTAAQ
IATGKPFAEAQRDLDAGIRHLARLKENGAIAYTSAPQAIQMLQSGQVPLVPFYGIFINPI
IEQGAPIKPAVPLAEGIHGEIVGLNMPVNAKNVELAERYVNMSLSREFQSKIDSVLHARA
ANKDVNPSPRTIELLGPAENILYADWRFLSEQRARLTDAWNNVFG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgcatcccgccgcaccctcctcaccgccgctgcgctctgcgccccatgggtg
accagccgcgcgcaatccgccggcacgctgaccgtggtgctcaaccagggcctgctggca
cggctctggattgacgagttgcacccggtgttcgagcgcgagaccggggcgcggctgaat
gtgcagcaatcggtcacgggcaatatgctcggcatgctgcgcacccagcgcgacaatccg
cccgacctcatgcagttctcggaagcgggtgtcttctccgccgcgcaggccggattgctg
cgcgcgcacaaccccgcgaacatccccaactgggcgagcctgcgcgatgccttcaagctg
gccgacaactactcggccggcgtcattgatgccgtgcacacgctctatttcaacacgcgc
gcccagacgacgcagcccacttcctgggcgcagctctgggacgcttcctcgcgccggcgc
gtggccattccgcccatcacctggaacagcggcgtccggatggtgacgacggcggcgcag
atcgccaccggcaaacccttcgccgaagcgcagcgcgaccttgatgccgggatccggcac
ctcgcccgcctcaaggagaacggcgccatcgcctataccagcgcgccacaggccatccag
atgctgcaatcgggccaggtcccgctggtgcccttctatggcatcttcatcaacccgatc
atcgagcagggtgcgcccatcaagcccgccgtgccgctcgccgagggcattcatggcgag
atcgtcggcctcaacatgccggtcaacgcgaagaatgtggaactggccgagcgctatgtg
aacatgagcctctcgcgcgagttccagagcaagattgacagcgtgctgcacgcccgcgcc
gccaacaaggacgtgaatccctcgccgcgcacgatcgagctgctcggcccggcggagaac
atcctctatgctgattggcgcttcctctccgagcagcgcgcgcggctgaccgatgcctgg
aacaacgtgttcggctga
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