Sediminicoccus rosea: LHU95_19000
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Entry
LHU95_19000 CDS
T08103
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
srf
Sediminicoccus rosea
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UPY36284
UniProt:
A0A9E7D9E1
LinkDB
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Position
complement(4003766..4010752)
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AA seq
2328 aa
AA seq
DB search
MLLATTGLLAVMQAAQVQAQGCGGTSCTIQGGSSAFSQILVPGANYSFTNNGAFSVTSGI
TDSPLTALQFIASGGDGTNSSSAPAGSGKPAFALTFVNNGSVIHNVPAAPQGPPAPQGPL
TVFSVYGASAGGNGGNYTNSDAKHDAGAAAAGADAAMLNTATITVSTSGALSSSPVVLST
GAALLVQSLGGNGGNVQPQSKPDSNGNPTYDAHNGTPGAAAGRAGLNNTGAITANLPQPL
MSEWYWGAAARSLGGNGGTGNDGTAGGAGGQAAVSNTANVSVSFAWGKPAGSTPAPAALG
GAAVVAVSQGGNGIMSVNGSAPGGGGVDGGAGGNAADASVFVSGQNRPITITLATANPTG
LASSPFSAAVAAISLGGVGGAGYNQSTGGRGGDTGFASVTGDSGVTVNATGDRTRGILAL
SQGGAGGRSGVGQDNSRAGSGGAAGFTSTNSPQISLSGTTISTTGLLSAGVMAANLGGAG
GNGQPYDSSLQFFRKGESGTAGFGGATGPVLVQITGGSVTTTGDQSPGVVALAQGGLGGT
GGAMSGQYGGSGTGGDGGLAGTATINIQGNAIITTSGGPATGNLEAAYGVSAASIGGAGG
AGGSIATNFASGRGNGGFGGDAQNVTVALAAGVSITTGGASASAVAARSLGGAGGAASPY
VTSGIGGSKDGNGGDGGRGGAVSVTNAATLRTGGTAAHGILAQSIGGLGGNGANGSGFFD
GNAGSGGNSGAPGSVNVSNSGRINTTGTGAFGIQAQSIGGGAGSGGAANGGIVAFGGSGG
TAIAGGATVVTNAGTIVTSGNFALGILAQSIGGGGGNGGDSQTIFTSIGGTGSSGGAGGA
TTVTQSGSSISTNGRLAYGLVAQSIGGGGGNGGDASATGAFVTLAIGGTASDGGAGGAVL
LNLSNNPSTGSAYSLIGTSGSNAGGILAQSIGGGGGAAGAGYATAVGAGFAVATALGGTG
GKGGDGGSVTVTLPGIRIATGQATAVGVNTNPVDAFGIHAQSIGGGGGIGGAATAQAIAI
PIQAAPSTVLGASISSALGGSGGAAGNGAGVTLSLTGGSIIRTQGQGSHGVLLQSIGGGG
GAGGDSSAMATTAGYGRAITAAGSTSFTLEASISLGGGSGSAGNGGSVTATLGSTTPDGS
SISTFGDYANGLVAQSVGGGGGNAGIGSSTTASFGNTNNATMSLGLGGRGGSGGTGGDVT
VTINPQSQVQTYGASAIGVLAQSIGGGGGTSQGGTLNLGASISPSDAATTYSGNLTINLG
TNGSSGGNGGAVTTTMQGQIITAGNDAAGVVLQSIGGGGGIAGSAGSDASSDNPISTLTG
LRSKITDKIEGNSTEGYVADISIGGRGGGGGVGGTVTYSQAGSITTYGDWSHGLVAQSIG
GGGGLGGAATSASSGASYSATFAVGGSGGSGGAGGAVNLTFGPASRIVTGVAGGTGYAAF
GVLAQSIGGGGGVGADGSVGSTGDHNIGGSGRSGGPGLLGSGSSVTIIGTANIVTRGDVA
VGMLLQSIGGGGGVSGSGSSASAALGRVSGATQIQVGGRNGVSGDGGTVSVGTAASPASL
TILTSGANAFGLLAQSIGGGGGFGFSTGQTDSTTNLLGASSTGTQSVGNGGAVTLNLTGG
NIQTTGLGAHGIIAQSIGGGGGIAGLPTGTANLSFAGGIRPDRPSPNGAGGAVTINSSTP
ITTTGAFAYGILAQSISGGGGLFAQSATQVFAGSTSAGGVILPGTGQAISITQSAPITVS
GFHSVGIFAQSSFIQPGPVTVNVSSAIQGGSGLGGWGIWVDGGTSTSTVTVAPGGSVSAL
SGLAIRMSQGSVTNNGTVTGGYNIDGTTGTFNNNGTLNAGPSLVAAQLVNTGTVLIGALE
PHGVSAVSGNFTQRSSGRLLFDADFSNRRSDVMTVAGSADLAGRVRPLISSVLPQVEIPF
LTVAGPVTGTLEGERTAIFSYNVNRKGGAFTVSANADFTPAGYSLNRNVAAVANHLQGAW
DAGGAGLGPLFALLGNTADAGGQGAYAAALRQISPNGSLAPGARVAAGARSFANAAMSCP
QFDGTTAMLREGECVWAGLTGRTAAQSSGDGLSSFRLNSMTWQAGGQWAMGGGWFLGGSI
AYENTRLSTTEGLNSGRGQAGYAAVTTKYQTGPWLLAGAVFGGGGEFNSTRTITLPGFGG
IARGSPALSNVGAMLRGTYTLGGEELYLRPSMTLSLVHARSGAYRESGAGVLNLEMSGAS
STVATLTPALEVGGRATLSNGVVLRLYTSAGVSLLSEGRWNQEGRMVSAPGAAGRFSSVV
RTDQVVGRFAAGMQVFATDRLELRLQYEGEYSANLTGHGGSLALAYRF
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgcttctggccaccaccggcctcctggccgtgatgcaggccgcccaggtgcaggcgcaa
ggctgcggcggcacgtcatgcaccatccagggcggcagcagcgccttcagccaaatcctg
gtgcccggggcgaattacagcttcaccaacaacggtgccttcagcgtcacttccgggatc
accgattcgccgctgacggccctgcagttcattgcaagcggtggcgatggcaccaactcc
tccagcgcgcccgccgggagcggcaagccggcctttgccctcaccttcgtaaacaacgga
agcgtcatccataacgtgcccgccgcaccgcaggggccgcccgcaccgcaggggccgctg
accgtcttcagcgtgtatggcgcttcagccggcggcaatggcggcaactacaccaacagc
gacgccaagcatgatgccggtgctgcggcggcgggcgccgatgccgccatgttgaatacg
gccaccatcaccgtttcgaccagcggcgcgctctcctcgtcgcccgtcgtcctcagcacc
ggggcggcgctcctcgtgcagagcctgggcggcaacggcggcaatgtgcagccccagagc
aagccggattccaacggcaacccgacctatgacgcccataatggcaccccgggtgccgca
gccgggcgggcggggctgaacaatacgggcgcgatcacggcgaacctgccccagccgctc
atgtctgaatggtattggggggcggcggcccgatcgctcggcggcaatggtggcactggc
aatgacggcaccgccggcggcgccggcgggcaggcggcggtcagcaacacggccaatgtc
agcgtcagcttcgcctggggtaagccggccgggtcaaccccggcgcccgctgccttgggc
ggcgcggccgtggtggcggtgagccagggcggcaacggcatcatgtccgtgaatggctcc
gcccctggcggcggcggcgttgacggcggcgcgggcggcaatgcggcggatgccagcgtt
ttcgtcagcggccagaatcggccgatcaccatcacgctggccaccgccaaccccaccggc
ctggcctcctcgcccttttccgccgccgtcgccgcgatcagcctgggcggtgttggcggt
gcgggctacaaccaatccacgggcggccggggcggcgacaccggcttcgccagcgtgacg
ggggattccggcgtcaccgtcaacgccacaggggaccgcacacgcggcatcctggccctc
tcccagggtggcgcgggcgggcgcagcggcgtcggccaggacaatagccgggcggggagc
ggcggcgctgccggcttcaccagcacgaacagcccgcagatctccctgagcggcaccacc
atctccaccacgggcctgctttcggccggcgtgatggcagcgaacctcggcggcgccggg
ggcaatggccagccctatgacagcagcctgcaattctttcgcaagggcgagtcgggcacc
gcgggattcggtggggcgaccggccctgtcctggttcagatcaccggcggctcggtcacc
accacgggcgatcaatcccccggcgtcgtggccctggcccagggcggcctgggcggcact
ggcggcgcgatgagcggccaatatggcggctccggcaccggcggcgatggcggcctggct
ggaacggccaccatcaacatccagggcaacgcgatcatcaccaccagcggcggccccgcc
accggcaatctggaggcggcctacggtgtttccgccgcttccatcggcggggctggtggg
gcgggcggcagcatcgccaccaatttcgcctcgggccgcggcaatggcggcttcggcggc
gacgcgcagaatgtcaccgtcgcgctcgcggcgggcgtgagcatcaccaccggcggcgcc
agcgccagcgcggtggcggcgcgcagcctgggcggtgcgggtggcgctgcctcgccctac
gtcacctcgggcattggcggctcgaaggatggcaatggcggggatggcggcagaggcggg
gcggtctccgtcaccaatgccgccacactcagaacgggcgggacggcggcgcatggcatc
ctggcgcagtccatcggcgggctgggcggcaatggcgccaatggcagcggcttctttgac
ggcaatgccggcagtggcggcaatagcggcgctccgggttcggtcaatgtgagcaattcg
ggccgcatcaacaccactggcaccggcgccttcggcatccaggcgcaatccatcggcggc
ggcgcgggcagcggcggcgccgcgaatggcggcatcgtcgccttcggcggctccggcggg
acggccatcgccggcggtgccactgtggtgacgaatgcgggcacgatcgtcaccagcggc
aacttcgcgctgggcatcctggcgcaatccatcggcggcggcggcggcaatggcggtgat
tcgcagaccatcttcacctccatcggcggcactggcagcagcggcggcgcgggcggtgcg
acgaccgtcacgcagagcggcagcagcatctcgaccaatggacggctggcctatggcctg
gtggcgcagtccatcggcggcggcggcggcaatgggggggatgcctccgcgaccggcgcc
ttcgtgacccttgcgatcggcggcactgcgtcggatgggggggcgggcggtgcggtgctg
ctgaatctgagcaacaaccccagcaccggctccgcctacagcttgatcggcacatccggc
tccaatgcgggcggcatcctggcccaatccatcggcggcggcggcggcgcggccggcgcg
ggctatgccacggctgtgggcgccggcttcgccgtggccaccgcgcttggcggtaccggc
ggcaaggggggcgatggcggcagcgtcaccgtcacgcttccgggtatccggatcgccaca
gggcaggcaacggccgtgggcgtcaacaccaatccagtggacgccttcggcatccatgcc
caatccatcggcggcggcggcggaatcggcggggcggccacagcccaggccatcgcgatc
ccgatccaggccgccccctccaccgtcctgggcgcctccatctcctccgccctgggtggt
tcgggaggtgccgccggcaatggcgctggcgttaccctcagcctcaccggtggcagcatc
atccggacccagggccagggctcgcatggcgtcctgctgcaatccatcggcggcggtggc
ggcgcgggcggcgattcctcggcgatggcgaccaccgccggctatggccgggccatcacc
gccgcgggcagcacctccttcacgctggaagcgagcatctcgctcggcggcggcagtggc
agcgcgggcaatggcggcagcgtgaccgcgacgctgggttcgaccaccccggatggctcc
agcatcagcactttcggcgattacgccaatgggctggtggcgcagagcgtcggtggcggc
ggcggcaatgccggcattggctcctcgacgacggcgagctttggcaacaccaacaacgcc
accatgtcgctcggcctgggcggtcgcggcggctcgggcggcacgggcggggacgtgacc
gtgaccatcaacccccagtcccaggtgcagacctacggggccagcgcgatcggcgtgctc
gcgcagagcattggcggcgggggcggcacctcccagggcggcacgctcaacctcggcgcc
agcatctcccccagcgatgccgccaccacctattccggcaacctgaccatcaacctgggc
acgaatggcagttcaggcggcaatggcggcgccgtcaccaccaccatgcaagggcagatc
atcacggcgggcaatgacgcggcgggcgtggtgctgcaaagcatcggcggcggcggcggt
atcgccggctcggccggctcggatgcctcgtccgacaatccgatttccaccctgaccggc
ttgcgcagcaagatcacggacaagatcgagggcaactccaccgagggctatgtggccgat
atctccatcggcgggcgcggcggcggcggcggcgtgggtggcaccgtcacctatagccag
gcgggcagtatcacgacctatggcgattggtcgcatgggctggtcgcgcaaagcattggc
ggtggcggcggcctcggcggggctgcgacctccgccagcagcggcgccagctattcggcg
accttcgcggtgggtgggtctggcggatcgggcggggcgggcggcgccgtcaacctgacc
ttcggcccagccagccgcatcgtgaccggtgtggccggcggcacgggctatgccgccttc
ggcgtgctggcgcagagcatcggtggcggcggcggcgtgggcgcggatggctcggtcggc
tcaaccggcgatcacaatatcggtggttcgggccgcagtggcggccccggtttgctgggc
tcgggcagcagcgtgaccatcattggcacggccaatatcgtgacgcgcggcgatgtggcg
gtgggcatgctgctgcaatccatcggcggtggcggcggcgtttcgggcagcggctcctcg
gcctcggccgccctcgggcgcgtcagtggcgcgacgcagatccaggtgggcggcaggaac
ggggtctccggcgatggcggtacggtgagcgtcggcaccgccgccagcccggcgtccctc
accatcctgacatcgggcgccaatgccttcggactgctcgcgcagagcatcggcggtggc
ggcggctttggcttctccaccggccagacggacagcacgaccaacttgctgggcgcgagc
agtacgggcacccagtcggtgggcaatggcggtgcggtgacgctcaacctgacaggcggc
aacattcagacgaccggtctaggcgcgcatggcatcatcgcgcagagcatcggcgggggg
ggcggcatcgccggcctgcccaccgggacggcgaatttgagctttgcgggcggcattcgg
cccgacagaccgtcacccaacggcgccggcggcgcggtgacgatcaattcctccaccccg
atcaccacgacgggggcttttgcctacggcatcctggcgcagtcgatcagcggcggcggc
ggtctgttcgcgcagagcgccacgcaggtctttgccggatcgaccagtgcgggaggcgtc
atcctgcccggcacaggccaggccatctccatcacgcagagcgcgcccatcaccgtctcc
ggcttccattcggtcggtatcttcgcgcaatcatccttcatccagccgggtccggtgacg
gtcaatgtctcctcggcgatccagggcgggtcgggcctggggggctggggaatctgggtg
gatggtggcaccagcaccagcacggtcacggtggcgcccggcggcagcgtctcggcgttg
tccggcttggcgatccggatgtcgcaaggcagcgtgaccaataacggcaccgtcaccggt
ggctacaacattgatggcaccactgggacgttcaacaacaacgggacgctcaatgccggc
ccgtccctggtcgcggctcagttggtgaacaccggaacggttctgatcggcgcgctggag
ccgcatggcgtctccgccgtcagcggcaatttcacccagcgctccagcggccgcctgctg
ttcgatgcggatttcagcaaccgccgctcggatgtgatgacggtggcgggctccgccgat
ctcgcgggccgcgtgcggccgctgatctcctccgtgctgccgcaggtggagatccccttc
ctgaccgtggccggccccgtcaccggaacgctggagggcgagcggaccgcgatcttcagc
tacaatgtgaaccgcaagggcggcgccttcaccgtctcggccaatgcggatttcacgccg
gccggctacagcctcaaccgcaatgtggcggccgtggcaaaccatttgcagggtgcgtgg
gatgcgggcggcgccgggcttggcccgctcttcgccctgctgggcaatacggccgatgcg
ggggggcagggggcctatgccgcggcgctgcgccagatttcgccgaatggcagcctggca
ccaggggcgcgcgtggcggcgggcgcgcgcagcttcgccaatgccgcgatgagctgcccg
caattcgatggcaccaccgcgatgttgcgtgagggcgaatgcgtctgggccggactgacc
ggccgcaccgccgcgcaatccagcggtgacggcctgtcgagcttccggctcaactcgatg
acctggcaggcgggcggccagtgggcgatgggtggcggctggttcctgggcggctccatc
gcctacgagaatacgcggctgtccacgaccgagggtttgaatagcgggcgcggccaggca
ggctatgccgcagtgacgacgaagtatcagaccgggccctggctgttggccggcgcggtg
ttcggcggcggtggcgaattcaacagcacgcgcaccatcacgctgccgggcttcggcggg
atcgcgcgcggcagcccggccctgtccaatgtgggcgccatgctgcgcggcacctatacg
ctgggcggcgaggaactctacctgcgtccctccatgacgctgagcctcgtgcatgcgcgc
tccggcgcctatcgcgagagcggggccggcgtgctgaacctcgaaatgtccggggcgtcc
agcacggtggcgaccttgacgccggcgctggaggtgggtggccgggcgacgctgtccaac
ggcgtggtgctgcggctctacacctcggccggcgtgagcctgctgagcgaggggcgctgg
aaccaggagggccggatggtcagtgcgccgggggcggcggggcgcttctccagcgtggtg
cggacggaccaggtggtgggtcgttttgccgcgggcatgcaggtcttcgccacggaccgg
ctggaactgcgcctgcaatatgagggcgagtacagcgccaatctgacgggccacgggggt
tcgctggcgctggcctaccgattctga
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