Sediminicoccus rosea: LHU95_20150
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Entry
LHU95_20150 CDS
T08103
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHU95_20150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_20150
Transporters [BR:
srf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHU95_20150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
UPY36506
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All DBs
Position
complement(4233509..4234780)
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AA seq
423 aa
AA seq
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MIGTAIALIIMFAAAVPIGFALGMAPLVALEAQRIPLIVVAQAALESLDSFTLLAIPFYV
MAGRIMLAGGMASRLVGLAAALVGWVRGGLGAAGVLTAMFFATISGSSSATAAAIGSILV
PEMTKRNYPKPYAAAIVAASGEIGVIIPPSIPMVIYAVTVSESIGSLFLAGILPGLLIGF
SLMGLIIVQSSMREYGDPTRFAPREIARDVVAATKRAALSLLMPIIVLGGIYGGIFTATE
AAVVAAVYALILGLFIYKELKWRDLPDILAGSAKTSAIVLIIVAFASVFAYVLTTYQAPQ
AVAAWLTAVTASPLIFLLLVNGFLFIVGMFMETLAAIIILAPVLAPAAIAFGIDPIHFGT
IVVVNLAVGMVTPPVGVNLFVACSISKLRMEQLMPPLLPFLATLILCLLIITYVPALSLA
LVR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtaccgccatcgcgctgatcatcatgttcgccgccgccgtcccgatcggcttc
gccctcggcatggcgcctctggtggcgctggaggcgcagcgcatcccgctgatcgtcgtg
gcgcaagccgcgttggagagcctggacagcttcaccctgctggccattcccttctacgtc
atggccggacgcatcatgctggcgggcggcatggcctcgcgcctggtgggcctggccgca
gcactggtcggttgggtgcgcgggggcctcggtgccgcgggcgtgctgacggccatgttc
ttcgccaccatcagcggctcctcctcggccaccgcggcggccatcggctcgatcctcgtg
ccagagatgaccaagcggaattatcccaagccctatgcggcggcgatcgtcgcggcttcc
ggcgagatcggcgtcatcatcccgccctccattcccatggtgatctacgcggtgacggtg
agcgagagcatcggctcgctcttcctcgcgggcatcctgccgggcctgctgatcggcttc
agcctgatggggctgatcatcgtgcaatccagcatgcgcgaatatggcgaccccacgcgc
ttcgccccgcgcgagatcgcgcgcgatgtggtggcggcaacgaagcgtgccgccctttcg
ctgctgatgcccatcatcgtgctgggtggcatctatggcggcatcttcaccgcgaccgag
gccgccgtggtcgccgccgtctatgcgctgatcctcggcctcttcatctacaaggagctg
aaatggcgggacctgccggatattctggccggcagcgcaaagacctcggccatcgtgctc
atcatcgtcgccttcgccagcgtcttcgcctatgtgctgacgacctaccaggcgccgcag
gccgtcgccgcctggctgaccgccgtgacggccagcccgctgatcttcctgctgctggtg
aacggctttctgttcatcgtgggcatgttcatggagacgctggcggccatcatcatcctc
gcacccgtgctggcgccggccgccatcgcctttggcatcgatcccatccatttcggcacg
atcgtggtggtgaaccttgccgtcggcatggtcacaccgccggtgggggtgaacctgttc
gtcgcctgcagcatcagcaagctgcgcatggagcagttgatgccgccgctgctgcccttc
ctggccaccctcatcctgtgcctgctcatcatcacctatgtgcccgcgctgtccctggcg
ctggtccgctaa
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