Sediminicoccus rosea: LHU95_21865
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Entry
LHU95_21865 CDS
T08103
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_21865
Transporters [BR:
srf02000
]
Other transporters
Pores ion channels [TC:
1
]
LHU95_21865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Milton
Motif
Other DBs
NCBI-ProteinID:
UPY36831
LinkDB
All DBs
Position
complement(4586173..4588116)
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AA seq
647 aa
AA seq
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MRRILPSTAAILALVTPALAQVAIPDTIVTATGVPTALERVPASITVINRRMIEENGFAN
LAEALASVPGLRVAQSGGPGQQASVFMRGNSSRSTLVLMDGVPVNDPSDANGAFNFGNET
LFDIERIEVLRGPASSLYGSAAIGGVINLVTRRAPADRTVMPYGEVAGGSQNTLRLGGGV
AGTVGAFDYLASLNNISTQASNATASRFFRTLGERDGFNSTNATARLGYTPIEGTRLEGL
VRWRENRIGIDSVPRDDPNYTGDDRRWLGQIRGESRLFDGVWTTGLRLAVTQDRRTYSNL
PDILSAARTQDYYSGTRQSVDWGNVVRLPSFGPATEGAVTFGVNYAHEDVTSYAGNVPFR
SSVAAKQDTTAGHAAVQYRFWDRLDVTGGVRYDSVSSFVGYTSWRVGAVLAVPEANMRIR
ASGGTAFNAPSLNQRFGIIGNTFRGNPNLRPETSIGYEFGAEMDIPAFGQQRFSTVGFTF
FQSRVTDLINFNAQFNSLTNVASANLKGVELVWALRPASWLTTEMAWTITDATDGQTGRV
LPRRPESVVSALARIEPIAGLVITPQIYFTGRSPEGAFATYLNSGASVSSPRNNKSGTLF
NLTASYRITPQITGFLEGRNLTDSKWEPVNGFQTPGRSAIIGTRFAF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtattctgcccagcaccgccgccatcctggcgttggtgacgcctgccttggcg
caagtcgccatccctgacaccatcgtgacggccactggcgtgcccaccgcgctggaacgc
gtccctgcctccatcactgtcatcaatcgccggatgatcgaggagaatggctttgccaat
ctcgcggaagccctggcgagcgtccctggccttcgtgtcgcgcaatcgggcggaccgggg
cagcaggccagcgtgttcatgcgcggcaattccagccgttcgaccctggtgctgatggat
ggggttccggtcaatgacccctccgatgccaatggcgccttcaacttcggcaatgaaacg
ctgttcgatatcgagcggatcgaagtgctgcgcggtccggcctcctcgctctatggcagt
gcggccatcggcggcgtgatcaacctcgtgacgcgtcgggcgcccgcggaccggaccgtg
atgccctatggcgaggtggctggcggctcacagaacaccttgcgcctgggcggcggcgtc
gccggcacggtcggcgccttcgactacctggcgagcctcaacaacatctcgacccaagcc
tccaatgccactgcctcccgcttcttccgcacgctgggtgagcgggatggcttcaacagc
accaatgcgacggcgcgcctgggctacacgccgatcgaagggacccggctggaagggctg
gtgcgctggcgggagaaccgcatcggcattgacagcgtgccgcgtgacgatccgaactat
acgggcgatgaccggcgctggctgggccagatccgtggcgaatcgcgtctgtttgatggc
gtttggacaaccggcctgcgcctcgccgttacgcaggatcgccgcacctactccaacctg
cctgatatcctcagcgcagcccgcacgcaggattactacagcggtacccgccaaagcgtg
gattggggcaatgtggtgcggttgcccagttttggccccgcgacggagggcgcggtgacc
ttcggcgtgaactatgcgcatgaggatgtgacgagctatgccggcaatgtgcccttccgc
tcctccgttgcggccaagcaggatacgacggccgggcatgccgccgtgcagtatcgcttc
tgggatcggctcgatgtcaccgggggcgttcgctatgacagcgtgagcagctttgtgggc
tataccagctggcgtgtgggcgcggtgctggcggtgcctgaggcaaatatgcgcattcgc
gcctcgggtggaacggcgttcaatgcgccctcgctgaaccagcgcttcgggatcatcggc
aataccttccgggggaatcccaatctgcgcccagagaccagcatcggctacgaattcggt
gcggagatggatattcccgcgttcgggcagcagcgcttttcgacagtcgggttcaccttc
ttccagtcgcgcgtgacggatctgatcaacttcaatgcgcaattcaactcactgacgaat
gttgccagtgccaatctgaaaggggtggagcttgtctgggcattgcgcccagcaagctgg
ctgacaacggaaatggcctggaccatcaccgatgccacggacggccaaacagggcgcgtt
ctgccgcggcggccggagagcgtcgtgagtgccctggcgaggatcgaacccatcgctggc
ctggtcatcacgccgcagatctacttcacgggacgttcaccggaaggcgccttcgccacc
tatctgaacagcggggcgagtgtcagctcaccgcgcaacaacaaatcgggcacgttgttc
aacctgacggcgagctatcggattaccccgcagatcaccggctttctggagggacggaat
ttgacggacagcaaatgggagccggtcaacggctttcagacgccggggcggagcgcgatc
atcgggacccgtttcgcgttctga
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