Sediminicoccus rosea: LHU95_22020
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Entry
LHU95_22020 CDS
T08103
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_22020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_22020
Transporters [BR:
srf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LHU95_22020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF7787
Motif
Other DBs
NCBI-ProteinID:
UPY36862
UniProt:
A0A9E7ACW4
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All DBs
Position
4616837..4617700
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AA seq
287 aa
AA seq
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MSSIRPGSAAAYWLAVPAGLWMFGAVVMPALLIVWVSLWGGRGFSTASPLTFENYIRFFS
NPTYLNLIATTLRHAAMLMAITGVLGYCIAYFLVVKLKSARWRTALFLAFIIPFWTSALI
RAIAWIPFLGVNGVINQGLMGLGVIDRPIEVFLFSRTGISMAQVSLYTLMASGPVVYMLS
QIPMALREAAMTLKAPPGVVFWRIIFPLTLPGVVIGQVLVFLSVMADFATVQWIGGNKIA
LLPNLVMNFYEGAQLRGAAVVAVVLMLCMLVGVGLAMRVADIRRLGR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatccggcccggatcagcggcggcctattggctcgcggtgccggccgggctc
tggatgttcggcgcggtggtgatgcccgcgctgctgatcgtctgggtatcgctctggggc
gggcggggcttttccacggcgagcccgctgaccttcgagaattacatccgcttcttcagc
aacccgacctatctgaacctgatcgccaccaccctgcgccatgcggcgatgctgatggcg
atcaccggagtgcttggctactgcatcgcctatttcctggtggtaaagctgaagagcgcc
cgctggcggacggcactgtttctggccttcatcatccccttctggaccagcgccctgatc
cgcgccatcgcctggattcccttccttggcgtcaatggcgtgatcaaccagggactgatg
gggctcggcgtgattgatcgcccgatcgaggtgttcctgttttcccgcacaggcatctcc
atggctcaggtctcgctctacacgctgatggcgagcgggccggtggtctacatgctgtcg
caaatcccgatggcgctgcgcgaggcggcgatgacgctgaaagccccgcccggcgtggtg
ttctggcgcatcatctttccgctgacgctgcccggcgtggtgattggccaggtgctggtt
ttcctcagcgtcatggccgattttgcgacggtacaatggatcggcggcaacaagatcgcg
ctgctgcccaacctcgtgatgaatttctacgagggcgcgcagttgcggggggcggccgtt
gtcgccgtggtgctcatgctgtgcatgctggtcggcgtggggctggccatgcgcgtcgcc
gatatccgccggctggggcgttaa
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