Sediminicoccus rosea: LHU95_22475
Help
Entry
LHU95_22475 CDS
T08103
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_22475 (addB)
Enzymes [BR:
srf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHU95_22475 (addB)
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LHU95_22475 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UPY36949
UniProt:
A0A9E7ADB6
LinkDB
All DBs
Position
4706437..4709463
Genome browser
AA seq
1008 aa
AA seq
DB search
MKLFAISPDQAFLPALARGVLARLGTGGELAAATILLPTRRAARALQTAFLRESAAPALL
LPRMRALAGLSTEDADELALPALLRLPPAVDALRRQAVLAGLASKLPRERGGPASAEHAW
ALGQELGRLLDEIALEEAETLPDDPALLGHRWLERLEALAPESLAVHWQITTTFLRAIVI
EWQGWLTDQGLLDLGVRRVLALRAQRVAWEDAPPDSGVIAAGIGMGGTVPAAADLLRVIA
TRLPQGFVVLPGEDAATAALPWEALREAPTHPYAGQRAMLDRMGATMADALPWVEAPPGR
LAALLGTALLPAGHLAPWQSPPGQNQTGQNPDAWAAPLAGLSRIEAGDAQHEAAAIALTL
RGALETPGARAALVTPDRDLARRVAAELPRHGILADDSAGQPLSDTPPGAFLRLIAQLAA
GECGPVALLSVLKHPLCAGGMERGDWLSATQALERAILRGPSPGPGLAGLRAALAGLRDA
EPRLAALLDALEAALGPFTALPRSPLRPAADLLAEHLAAAEALASTPALPGGLRLYAQAE
GEALARHLAALAPAMAEFPALSPADWPGLFDAALAQGSTRAARISRGRSDATHPQVEILG
LLEARLLDFDLVVLGALDETIWPQASDPGPWMSRPMRREFGLPSPELRIGRVAADFLLTA
SASCRAVLSRAARRGGSPAVPARWLTRLDVFLRGQNGLALTAEPCAEWARLLDLPAEIRP
CARPAPRPPRDARPERITVSDVATLIADPYAFYAQRILKLRRLDPLEQEPGAPDYGNLIH
AAIHRFLNALPQAWPGEDAARPLWDAAARRALDEAALRPAVAALWAPRLARIGGFIRGLE
AQQRNGLLATWPELKASVTVKRPGGSITLQARADRVDRRLDGTLRILDYKTGTVPSKRDV
EAGTAPQLPLEAWLAEQGGFQGVPPGPVAALEYWRLTGADQPGEVRALALDIPAAIAEAE
AALHRLADRFLLGDGAFPAHPHPRRRAGLDYQHLARMAEWSAEAEGEA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgtttgccatcagccccgaccaggccttcctgccggcgctggcgcggggtgtg
ctggcgcggctgggcaccgggggggaattggccgccgccaccatcctgctgcccacccgc
cgtgccgcccgcgccctgcaaaccgccttcctgcgcgaatccgcggcacccgcgctgctg
ctgccccgcatgcgcgctttggccggcctctcgaccgaggatgccgacgagctggcgctg
cccgccctgctgcgcctgccgccggcggtggatgcgctgcgccgccaggccgtgctggcg
ggcctggccagcaagctcccgcgggagcgtggcggccccgccagcgccgaacacgcctgg
gcgctgggccaggagctgggcaggctgctcgacgaaatcgccctggaggaggccgaaacc
ctgccggatgacccggccctgctcggccatcgctggctggagcggctggaggcgctggcg
ccggaatcgctcgcggtgcattggcagatcaccaccaccttcctgcgcgccatcgtcatc
gaatggcagggctggctgaccgatcaggggctgctcgatctcggcgtgcggcgcgtgctg
gcgctgcgcgcgcagcgtgtggcctgggaggatgcgccccctgacagcggcgtgatcgcc
gccggcatcggcatgggcggcaccgtgcccgccgcggccgacctgctgcgcgtcatcgcg
acacggctgccacagggtttcgtcgtgctgcccggcgaggatgcggcgacggccgccctg
ccctgggaggcgctgcgcgaggcgcccacccacccctatgccggccagcgcgccatgctg
gaccgcatgggcgccaccatggccgatgccttgccctgggtggaggctccccctggccga
ttggcggcgctgctgggcaccgccctgctgcccgccgggcatctggcgccttggcaaagc
ccacctgggcaaaaccagactgggcaaaaccccgacgcctgggccgcgccactggccggg
ctcagccgcatcgaggcgggtgacgcgcagcatgaggcagccgccatcgcgctcaccttg
cggggcgcgctggaaacccccggcgcgcgggccgcgctggtaacgccggatcgggacctc
gcgcgccgcgtcgccgccgaattgccgcgccacggcatcctggccgatgacagcgcgggc
cagccgctgtccgacacgccacccggcgctttcctgcgcctgatcgcgcagctcgcggcg
ggggaatgcgggccggtggcgctgctctccgtgctcaagcacccgctttgtgcggggggg
atggagcggggcgattggctctccgccacccaggcgctggaacgcgccatcctgcgtggg
ccttcgcccggcccgggccttgccgggctgcgcgcggcgctggccgggctcagggatgcc
gaaccgcgcctggccgccttgctcgatgcgctggaggcggcgctcggccccttcaccgcc
ctgccgcgcagcccgctgcgcccggcggctgacctgctggccgagcatctggccgctgcc
gaggcactcgccagcacgcccgccctgcccggcggcctgcggctttatgcccaggcggag
ggcgaggccctggcgcggcacctggccgccctcgccccggccatggcggagtttccggcc
ctgtcgccggcggattggccgggattgtttgacgcagccctcgcccagggcagcacgcgg
gccgcgcgcatctcccgcgggcgcagcgatgcgacgcatccccaggtggaaatccttgga
ctgctggaagcccggctgctggatttcgacctggtggtgctgggcgcgctggatgaaacc
atctggccccaggcgagcgaccccggcccctggatgagccggcccatgcggcgggaattc
ggcctgccctcgccggaattgcgcattggccgggtggcggcggatttcttgctgacggct
tccgcctcatgccgggcggtgctgtcccgcgccgcgcggcgcggcggcagccccgccgtg
ccggcgcgctggctgacgcggctggatgtttttctgcgaggccagaacggcctggccctg
acggccgagccctgcgccgaatgggcgcggctgctggacctgccggccgaaatccgcccc
tgcgcccgccccgcgccccgccccccgcgcgatgcccggcccgagcgcatcacggtcagc
gatgtcgcgaccctgatcgccgacccctatgccttctacgcccagcgcatcctgaagctc
cgccgcctcgatccgctggagcaggagccgggcgcaccggattacggcaacctgatccat
gccgcgattcatcgctttctcaacgccctcccgcaggcctggccgggcgaggatgccgcg
cggccgctttgggacgcggccgcgcggcgcgcgctggatgaggccgcgttgcgcccggcg
gtggccgccctctgggcgccgcgcctggcgcggatcggcggcttcatccgcgggctggag
gcgcagcagcggaatgggctgctggccacctggcccgaattgaaggcgagcgtcacggtg
aagcgcccgggcggcagcatcacgctgcaggcgcgggcagatcgcgtggatcggcgtctg
gacggcacgctgcgcatcctggactacaagaccggtaccgtcccctcgaagcgggatgtg
gaggccggcaccgcgccgcaattgccgctggaagcctggctggccgagcagggcggcttc
cagggcgtgccgcccgggccggtcgccgcgctggagtattggcgcctgacgggcgcggat
cagccgggcgaggtgcgtgccctcgccctcgacatcccggccgccatcgccgaggcggaa
gccgcgctgcatcgcctcgcggatcgcttcctgctgggcgatggcgcctttcccgcgcat
ccacatccccgccgccgcgccgggttggattatcagcatctcgcgcgcatggccgaatgg
tcggccgaggcggagggcgaggcatga
DBGET
integrated database retrieval system
