Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00017
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Entry
XF24_00017 CDS
T04487
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Pathway
srg00550
Peptidoglycan biosynthesis
srg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XF24_00017 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srg01011
]
XF24_00017 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
srg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
XF24_00017 (spoVD)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
AKH32382
UniProt:
A0A288GS24
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All DBs
Position
complement(13289..15802)
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AA seq
837 aa
AA seq
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MTIQQILHQISRNVRAIRQDFKSNYPQFYRFTQTKERTVVLIFLLLLGILFLRVFYIQLI
QGSYYQQLLNQNHSLSQTTQAKRGNIYVSDASQIQPLKLTENVTLYNMFIDPSMVFDKPR
LISIITPLLYLHLCQTNGFDNVDKEACIKNVENFTKETILPIAPTVFYYGDGIITGGSSV
TGGSTTGMSVSLDSFDWTGYNAQYQEILSGMAKEQLEEKISQRLDSMIVVGDRKYNYLGY
YSDIALINELRNLNRDYIYIYNNNYVFIEPKVWKNSAVSLATARKEIEAVLVKRGYLNDS
LKVKNLFTVRNYRYVRLVTGVNPSIVDALNQLKTIYYSEKVGPNKIPLLHGIGTESYNKR
YYPYGKFMSHILGYMSNNGDATYGVEEYFDDLLKGIDGSIEGTASSMIGQLGANDVKIKN
AENGYDVYLTIDPVIQTQAEKIIGQYRDRFRADSVSMLVYDPFSGHVLASANAPDFDPNH
YNDIYTLKALQPSQAQLVDNPTFLDFPIYIQTGGETRLATRVERQDTTIAKYVANNPLGP
NLFVDKNIAYPYEPGSIFKAFTFAIGLDQNEIDLYDRYADPESQVKVGPYTIKNASVEAC
RGTHTFLHALQHSCNVGMVRIAQKLTQNTFYNYLEKLNFGSLTNIELAGEDPGYVEGVGS
VSVARFFNNVFGQGLLVTPIQIAAGYGAMLNGGTYLKPTILDKLCESGTDNCQINQTKVI
RQVFEPRISEQLAYSLTKVIEIPENGKYADLPQYNVGGKSGTSQISYRGRYMAGNGWTNG
SFVGIVTEDNPKYIVVIQVRRPRSTQWGNQTAGVIFKDMASFLINYATLRGEKFEVN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgactatacaacaaatattacaccaaatttctcgtaatgttcgtgctatacgacaagat
tttaagtcgaattatccacaattttatcgttttacacaaaccaaagaacgaacggttgtg
ttaatttttctattgttactatgaatcttatttctaagagttttttatattcaacttatc
caatgatcatattatcaacaattactcaatcagaatcatagtttatctcaaacaactcaa
gcgaaaagatgaaatatttatgtgagtgatgcatctcaaattcaaccactcaaattaaca
gaaaatgtaacactctataacatgtttattgatccctctatggtcttcgataaacctaga
cttattagtattatcactccactcctctaccttcacctctgtcagacaaatggttttgat
aatgttgataaagaagcttgtataaagaatgtagagaattttacgaaagaaacgatttta
cctatagcacctaccgtattttattattgagatggtataattacttgatgatcttcagtt
acaggcggtagtactacaggtatgagtgtgtccttagatagctttgattggacagggtat
aatgctcaatatcaagaaatattgtcatgaatggcgaaagaacaattagaagaaaaaata
tcacaaagacttgatagtatgattgttgtatgagatagaaagtataattatttatgatat
tattctgatattgcgcttattaacgagctaagaaatttaaatcgtgattacatttatatt
tacaataacaattatgtttttatagaacctaaagtatggaagaattctgcagtatcttta
gctacagcaagaaaagaaatagaagcagtgcttgttaaacgttgatatctcaatgattct
ttaaaagttaaaaacttatttacagtacgtaattatagatatgtgagacttgttacaggt
gttaatccaagtattgttgatgcactcaaccaattaaagacaatttattattcagaaaag
gtcggacccaataagattccgcttcttcatggtataggtacagagtcatataataagaga
tattatccttatggtaaatttatgtcacatattttgtgatacatgtctaataatggagat
gcgacatatggtgttgaagaatattttgatgatttattaaaatgaattgatggaagtatt
gaaggtacagcttctagtatgatatgacaattatgagcaaatgatgtaaaaattaaaaat
gcagaaaactgatatgatgtttatcttactattgatccagttattcaaactcaagcagag
aaaataatttgacaatatcgtgatagatttagggcagatagtgtgagtatgcttgtttat
gatccctttagtggacatgtcttagcatcagcaaatgcaccagattttgatcctaatcat
tataatgatatttatactttgaaggcactgcaaccttctcaagctcaattggttgataac
cctacttttttggattttcctatctacattcaaactggaggagaaacaaggttagcaaca
agagtagagagacaagatacaactattgctaaatatgttgcaaataatccactctgaccc
aatctttttgtcgataaaaatatcgcgtatccctacgagccaggttcgatttttaaagca
tttacattcgcgattggattagatcagaatgaaattgatctttatgatcgatatgctgat
ccagaatctcaagtaaaagtatgaccttatacgattaaaaatgcatcagtagaagcatgt
agaggaactcatacatttttacatgccttacaacactcctgtaatgtaggtatggtacgt
atagcacaaaaattaacgcaaaatacgttttataattatctcgaaaaattgaatttttga
tcattgacaaatattgagcttgcttgagaagatccgtgatatgtagaaggagtatgatct
gtgtcagtagcaagattttttaataatgtatttggacaaggtctactcgtaactccgatc
caaatagctgctggttatggtgctatgttaaatggtggtacgtatctaaaaccaacaatt
ttagataaactttgtgaatcaggtactgataattgtcagataaatcaaacaaaagtaatt
agacaggtttttgaacctcgtatatccgaacagcttgcttattctctcaccaaagtaatc
gaaattcctgaaaatggtaaatatgcagatcttccacaatataatgtatgatgaaaatca
tgaacatcgcaaatttcttatagatgaagatatatggcttgaaatggttggacaaatggg
tcttttgtgggaattgttacagaggataatcctaagtatattgttgtgatacaagtacgt
cgtccaagatctacacagtggtgaaatcaaactgcatgagttatatttaaagatatggca
tcatttcttattaattatgctacattgagaggagaaaaatttgaagtaaattaa
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