Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00019
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Entry
XF24_00019 CDS
T04487
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Pathway
srg03030
DNA replication
srg03430
Mismatch repair
srg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XF24_00019 (dnaE_1)
03430 Mismatch repair
XF24_00019 (dnaE_1)
03440 Homologous recombination
XF24_00019 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srg03032
]
XF24_00019 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
srg03400
]
XF24_00019 (dnaE_1)
Enzymes [BR:
srg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XF24_00019 (dnaE_1)
DNA replication proteins [BR:
srg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XF24_00019 (dnaE_1)
DNA repair and recombination proteins [BR:
srg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XF24_00019 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AKH32384
UniProt:
A0A288GTC0
LinkDB
All DBs
Position
16500..19496
Genome browser
AA seq
998 aa
AA seq
DB search
MDIFEFELRYKAYAGLNRFCKLGRDEKNLINMVAITKKGSPDKALQEISPEELKSLTRDT
YTSYKHNYISAHNDFTDFFSQSDFYYPLSEYIERLEYELKVVKEMGFNTYMLVVSDFTSR
AKNNNIMVGPGRGSGAGSLLAYLISITDVNPFAYDLLFERFLNPARISMPDFDIDFEDTL
RNQVVEYVTHKYGKDHVSAIGTYMKMATKAAFKDAARAIGIPFEKSNQVSNLMGEIKSLK
QVIDKDPSVNEELLGMYDQEKYIQESIIQGSQLEGNLRQLGVHACGIIISPDPVTEHTAT
QIITKGTEKTLVSQFDGPTLEYIGLLKMDFLGLRNLSVIKNCIKILRAKYKNLTEEQALH
QGEKYYLEDKVLFDEFAHTMSFNPDMTKDEVFEQVFMTGDTTGIFQFEGDGIRRFLIDLK
PNHINDLVAMNALYRPGPLEFIPTYIKRKHGEEPVNYMLPELKEMLLSRYKDDNLIINET
QKLEEDLGPIMNLTYGIAVYQEQLMFLVQSMAGFSLPEADLLRRGVGKKKKEIIEQLKLE
FMKRAQSFRDYKPETAQFIYEKMIEPAASYSFNKSHAVCYAHIAYQTGYLKARYPLEFYA
ALLRSVEEDTDKLAGFIDEILAHNIRIEPPNINKAYNHIAAGTSTIIMGFYACKGIGFEI
GEQIEQERKTNGVFTSLANFLERCPFVANKRVLESLIKAGAFDERYDRNTLLINLPTLLE
WHKNAAQLDMGLFGGMAETQELIFQETSTTSIVEQCKYDVEIFKNMISGHPLDGLYPYAK
KFGFIEQVKKVSDPIAFSCIAMVKKITRARKKGFFILVEDITDSFEFFIKDLLDIKLYDL
LIISGFKSRNRGIDTMIKVPIEQVIEQAQKSGKYDPQWTVAKVRAGRKGQTVSAITPSSL
ELESEQTTEMIQEQEGMDLTDIDIGAEDSERDVENIQEETTTYGPIHITLPDSLEKIKLL
GNIITSHPGDDHTISVHNKTYTISQQGMDLIQQITTVA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
gtggatatctttgaattcgaacttcgttataaggcatatgcaggactgaatcgtttctgt
aaactttgacgagatgaaaaaaaccttattaatatggttgcaattactaaaaaaggctcc
cctgataaagcattacaagaaatatctccagaagagcttaaatcattaacaagagatacc
tacacgagctataaacataattatatttcagcacataatgattttacagattttttttct
caatctgatttttattatccactcagtgaatatattgaacgtctagagtatgaacttaaa
gttgtaaaagaaatgtgattcaacacctatatgcttgttgtgtctgatttcacgagtcga
gcaaaaaataacaatattatggttggtcctggaagatgatctggtgcaggttctctcctt
gcttatcttatttctatcaccgatgtcaatccttttgcatatgaccttctctttgaaagg
tttttgaatcctgcacgtatttcaatgcctgattttgatattgattttgaagatacgttg
agaaatcaagtagtagaatatgtaacacacaaatatgggaaagatcacgtatctgcaatt
tgaacgtatatgaaaatggcaacaaaagcagcatttaaagatgcggcaagagcgattggt
ataccatttgaaaaatcaaatcaagtttccaaccttatgggagaaataaaatccttgaaa
caagttattgataaagatcctagtgtaaacgaagagcttttatgaatgtatgatcaagaa
aaatatatacaagagtctattattcaatgatctcaactcgagtgaaatcttagacaacta
tgagtacatgcttgtggaattattatttctccagatcctgtaactgaacacacagcaacg
caaattataacaaaatgaactgaaaaaacactagtaagtcaattcgatggaccaacatta
gaatatatcggcttattaaaaatggattttttatgattaagaaatctttcagttattaag
aactgtatcaaaattttaagagcaaaatataaaaatctgacagaagaacaagcactacat
cagtgagaaaagtattatcttgaagataaagtactatttgatgaattcgcacataccatg
tcatttaatccagacatgactaaagatgaagtatttgaacaagtgtttatgacaggagat
actactggtatttttcaatttgaatgagattgaattagaagatttttgatagacctcaaa
ccaaaccatatcaatgatcttgttgcaatgaatgcactctaccgtccaggtcctttggaa
tttattcctacctatatcaaaagaaaacatggagaagagcctgtaaactatatgctaccg
gaacttaaagagatgctcttgtcacgttataaagatgataatctcataataaatgaaaca
caaaaacttgaagaagaccttggcccaattatgaatctcacttatggtattgctgtctat
caagagcaactcatgtttttggtacaatctatggcgtgattctctctacctgaagcagac
ctcttaagaagatgagtaggtaaaaagaaaaaagaaatcattgaacaactcaaattagag
tttatgaaaagagcacagtcttttagagattataaaccagaaactgctcaattcatctat
gaaaaaatgattgaacctgctgcgtcttattcatttaacaaatctcatgccgtatgttat
gctcacattgcctatcaaactggatatctcaaagctcgttatcctctagaattttatgct
gcattacttaggtcggtagaagaagatactgacaaacttgcatgattcattgatgaaatc
ttagctcataatattcgtatagaaccgcctaatatcaataaagcatataatcatattgca
gctggtacttcgactattattatgtgattttatgcttgtaaaggaatagggttcgaaata
ggagaacaaattgaacaagaaagaaaaacaaatggagtatttacttcgctagcaaatttt
ttagaaagatgtccttttgttgctaataaaagagtattagaatctctgattaaagcagga
gcatttgatgaacgatatgaccgtaatacacttttaatcaaccttccaacgttacttgaa
tggcacaaaaatgctgcacagcttgatatgtgattgtttggtggcatggctgagacacaa
gaacttattttccaagagacaagcacaacaagtattgtagaacaatgtaaatatgatgta
gaaatttttaaaaatatgatttcctgacatccattggatggactgtatccgtatgccaaa
aagttcggattcatcgaacaagtcaagaaagtgtcagatccaattgctttctcctgtatc
gctatggtcaaaaaaattaccagagcaagaaaaaaatgattttttattctggtagaggat
attaccgattcatttgaattctttattaaagatctgttggatattaaactttatgatctc
ctaattatatcaggattcaaatcaagaaaccgatgaattgatacgatgattaaagttcct
atagagcaagtcattgaacaagctcaaaaaagtgggaaatatgatccacaatggacagta
gcaaaagtaagagcaggtagaaaatgacagactgttagtgctatcacaccatcatctctt
gaactcgaatcagaacaaactactgaaatgatacaagagcaagaatgaatggatcttacg
gatatagatatttgagcagaagatagtgaaagagatgttgaaaacatacaagaagaaacg
acaacatactgacctattcatattaccttaccagattctcttgagaaaattaaacttctt
ggtaatattattactagtcatcctggtgatgatcacactatctctgttcataataagaca
tatactatatcacaacaaggtatggatctcatacaacagattaccactgtagcataa
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