Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00148
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Entry
XF24_00148 CDS
T04487
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Pathway
srg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XF24_00148 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srg03019
]
XF24_00148 (groL)
03110 Chaperones and folding catalysts [BR:
srg03110
]
XF24_00148 (groL)
03029 Mitochondrial biogenesis [BR:
srg03029
]
XF24_00148 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srg04147
]
XF24_00148 (groL)
Enzymes [BR:
srg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XF24_00148 (groL)
Messenger RNA biogenesis [BR:
srg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XF24_00148 (groL)
Chaperones and folding catalysts [BR:
srg03110
]
Heat shock proteins
HSP60 / Chaperonin
XF24_00148 (groL)
Mitochondrial biogenesis [BR:
srg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XF24_00148 (groL)
Exosome [BR:
srg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XF24_00148 (groL)
Exosomal proteins of other body fluids (saliva and urine)
XF24_00148 (groL)
Exosomal proteins of breast cancer cells
XF24_00148 (groL)
Exosomal proteins of colorectal cancer cells
XF24_00148 (groL)
Exosomal proteins of bladder cancer cells
XF24_00148 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AA_synth
Toprim
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AKH32513
LinkDB
All DBs
Position
143412..145061
Genome browser
AA seq
549 aa
AA seq
DB search
MSAKIIKYGDDARKEIFQGMEQVAKTVMVTMGPKGKNVLLSKSFGAPVPTNDGVTVAKEI
EFEDQYHNTGAAIVKEAADKTNKQAGDGTTTTTTLLYGIANEGQRYIRAGVNPFALSKGL
HKGVAKIIEELQTKATPVSNKEEIKQVASISAQDEEVGQLIADIIDEVGKDGVISVEEGK
SMGLTKEVVIGMQFDQGYGSPYFVSDPQRMEAVIENASLLITDKKISSLKDIINVLESLA
ATGRKNIVIIADDVEGEALTSLVLNKMRGAINVLTVKAPGFGDRKKEILKDIAAVTGATV
ITEELGLKLEEATLDMLGAADKVISSKDKTTIVGGKGELSDIDARVNDINAQFERSSSDY
DKEKLAERKARLVGGVAVIKVGAATEMEMKNKKYKIEDALNATRAAVEEGIVPGGGVTLA
NIAKSLEHFNLEDADEHIGIEILKEAIQYPVKKIADNAGYKGDWVVEAIKAQDEFNFGFD
AKTGEFKNMLQAGIIDPAKVLRVSLENAVSAAAMFLTTDAIIVDAPKKDEPMAGAGMGGM
GGMGGMDMY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaaatcatcaaatacggcgacgatgctcgcaaagaaatatttcaaggtatg
gaacaagtagctaaaacagtaatggttactatgggaccaaaaggtaaaaacgtccttctc
agtaaatcatttggtgctccagtaccaaccaacgatggagtaactgttgctaaagaaatt
gaatttgaagatcaatatcacaatacaggagctgctatcgtcaaagaagcagctgataag
acgaataaacaagcctgagatggaactactactactactacactcctgtatggtattgcc
aacgaatgacaaagatatattagagcgggagtaaatccttttgcgctttctaagggactg
cacaaaggtgtcgctaaaattatcgaagaacttcaaacgaaagctaccccagtctccaat
aaagaagaaatcaaacaagttgcatctatctcagcacaagatgaagaagttggtcaattg
atagctgatatcatagatgaagtagggaaagatggtgtaatatcagtagaagaaggaaaa
tctatgggattgacgaaagaagtagttataggaatgcagtttgaccaaggatatggttct
ccatactttgtatctgatccacaacgtatggaagcagttatagaaaatgcatcactcctt
attactgataaaaaaatcagttctctcaaagatattatcaatgtactcgaatctcttgct
gccacaggacgcaaaaatattgttatcattgctgatgatgtggaaggtgaagctcttact
tctcttgttttaaacaaaatgagaggtgctatcaatgtcctcaccgtgaaagctccagga
tttggtgatcgtaaaaaagaaattctcaaagatatcgcagcggttactggtgcaaccgtc
atcacagaagaacttggactcaaactcgaagaagcgacacttgatatgctaggtgcagct
gataaagttatttcatcaaaagataaaacaacgattgtaggaggaaaaggtgaactttct
gacatcgatgcacgtgtaaacgacattaacgctcagtttgaaagatcaagttctgattat
gataaagaaaaacttgctgaacgtaaagcaagacttgtaggaggtgtggctgtcatcaag
gtaggagctgctacagaaatggagatgaaaaataagaaatataagatcgaagatgcgctc
aatgctacacgtgctgcagtagaagaaggtattgttcctggaggatgagtaacgcttgct
aatatcgctaaatcactcgaacacttcaatcttgaagatgctgacgaacatatcggtatc
gaaatcctcaaagaagctatccaatatccagtcaaaaagattgccgataatgcaggctac
aaaggtgactgggtagtagaagctatcaaagcacaagatgaatttaactttggatttgat
gctaagactggtgagtttaaaaatatgctccaagcaggtatcattgatccagccaaagta
ctcagagtatcactagaaaatgctgtctcagcagctgcgatgttcttgactactgatgct
atcatcgttgatgcaccaaagaaagacgaacctatggcatgagctggtatgtgaggtatg
gggggaatgtgatgaatggatatgtactaa
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