Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00159
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Entry
XF24_00159 CDS
T04487
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Pathway
srg03420
Nucleotide excision repair
srg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XF24_00159 (pcrA)
03430 Mismatch repair
XF24_00159 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srg03400
]
XF24_00159 (pcrA)
Enzymes [BR:
srg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XF24_00159 (pcrA)
DNA repair and recombination proteins [BR:
srg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XF24_00159 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
XF24_00159 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
PcrA_UvrD_tudor
UPF0147
AAA_30
AAA_11
PIF1
ResIII
Dabb
Motif
Other DBs
NCBI-ProteinID:
AKH32524
UniProt:
A0A288GTQ1
LinkDB
All DBs
Position
159025..161232
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AA seq
735 aa
AA seq
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MSVLNDYIKTKLNEEQYASAVHTDTSALILAGAGSGKTRVLTYKIAYLMFGKSIPLSHIL
AVTFTNKAAKEMKERLMHLSEELSTTLPGAHKIHFSRNNNWIGTFHSIFLRILKEDIDQT
MFGFTKNFGVYDTDEAFSLIKKIMKDDKVDKVITPKEVKNYISKLKNEGTTADMYAKMVQ
TPQDNIIADTYKKYQTQLQITNAMDFDDLLLYPYRMFKDYPEILKKRQIQFQYILVDEAQ
DTNWIQFELMKQLTQVIVRDETLHNQGLKKPNITLIGDDFQSIYGRRGALMENFLNVKKI
WPDIEIFKLQTNYRSKPHIVHAGSAVIKNNTKQYEKDIVAHRAGNEKIVIFNHTDESSEA
LNIVEFIAKLKEQNNKQWSDFAILYRTNAQSSPFEQVLVQEGVPYKIFGAFRFFDRKEVK
DIVSYLKYLINNRDNVALKRIINIPSRKLGDTTIKKIEDTALTQEVSMHDVLIAIDALSA
DINMPTRERLKEFNKLIEYLLQKSTDLTPSGIIKQVIAQIDYKAHLLKEEGGNQQAADDR
YANIGQLINMGEKYDELGISGLSRLMDEISLLTDAAENADESIDSIKLMTVHSSKGLEFK
NVFLVGVEENVFPLGNARLEVKLLEEERRLMYVAITRAEDHLFISYADSRMQWGQTMYNR
PSRFLEEIPEELKKTYSLAENRSFSRPSFDEGDIVSHKLFGKGTIIEIRGEIAIIKFQNT
TFGVRKVPLKLVSPA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtactcaacgattatatcaaaacaaaactcaatgaagaacaatacgcttctgcc
gtccatactgacacttctgcgctgatattagcaggtgcttgatcttgaaagacaagagtt
cttacctacaaaatcgcatacctgatgtttggaaaatcaattcctctttctcatattctt
gctgtgacgttcaccaataaagccgcaaaagaaatgaaagaaagactcatgcatctcagt
gaagaactcagcactacccttccatgagcacacaaaatacatttctctcgaaacaacaat
tggattggaaccttccactcaatctttttaagaattttaaaagaagatattgaccagacg
atgttcgggtttaccaaaaactttggagtctatgatacggacgaagcattttctctcatc
aagaagatcatgaaagacgataaagttgataaagtgattactcccaaagaagtcaaaaac
tatatatccaaactaaaaaacgaaggtacaacagctgatatgtatgctaaaatggtacaa
actcctcaagacaatatcatagctgatacgtataagaaatatcaaacccaacttcaaatt
accaatgcaatggattttgatgatcttcttctctatccctatcgtatgttcaaagattat
ccagaaattctcaagaaacgacagatacaatttcagtacatactcgtagatgaggcacaa
gataccaactggattcagtttgaacttatgaaacaactcacacaagtcattgtcagagat
gaaacactccataatcaatgactaaaaaaaccaaacatcactctcatcggagatgatttt
caatctatttatggacgacgtggagctttgatggaaaattttttaaatgtaaagaaaatt
tggccagatatcgagatctttaaactccaaacaaactatcgttctaaaccacatattgtc
catgcaggttctgctgtgatcaaaaataatacaaaacaatatgaaaaagacattgtagct
catagagctggtaatgagaagattgtaatttttaatcatactgatgagagttctgaggca
ctcaatatcgtagaatttatcgccaagcttaaggagcagaacaacaaacagtggtcagat
tttgctattttgtatcgtaccaatgctcagtcttcaccatttgaacaagtattagttcag
gaaggagttccttataaaatttttggtgcttttagattttttgatcgtaaagaggtaaaa
gatatcgtgtcatacctgaaatatctcatcaataatcgtgataatgtagctctcaaaaga
atcatcaatattccatctcgcaaactaggagacaccacaatcaaaaaaatcgaagataca
gcactaacacaagaagtaagtatgcatgatgtactcatcgcgattgatgcactttctgca
gatattaatatgccaacaagagaaagactcaaagaatttaataaactcatagaatattta
cttcaaaaaagtactgatctgaccccatcaggtattatcaaacaagtgatcgctcagata
gactataaagctcatctcctgaaagaagagtgatgaaatcaacaagctgctgatgacaga
tatgcgaatattggacagctgatcaatatgggagagaaatatgacgaactcggaatctca
ggattatcaagacttatggatgaaattagtcttcttactgatgctgccgaaaacgctgat
gaatctatcgatagtatcaaacttatgaccgtccactcatcgaaaggactagaatttaag
aatgtctttctcgtttgagtagaagagaatgtctttccattaggaaatgcaagactagaa
gtaaagctcctcgaagaagaaagaagacttatgtatgtagcgattacaagagcagaagat
cacctcttcatttcctatgctgactcacgtatgcaatggtgacaaaccatgtacaatcgt
ccttcgagatttttggaagaaattcctgaagagctcaaaaaaacctattctcttgctgaa
aatagatcgttctctcgtccatcgtttgatgaaggagatatagtgagtcataaactattt
ggaaaaggtactatcattgaaatccgatgagaaatcgcgattattaaatttcaaaacacc
acctttggagtcaggaaagtacctttgaaacttgttagtcctgcttag
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