Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00219
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Entry
XF24_00219 CDS
T04487
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
HARE-HTH
DUF2161
Mnd1
DUF4777
LexA_DNA_bind
WH_Rok
Motif
Other DBs
NCBI-ProteinID:
AKH32579
UniProt:
A0A288GSP2
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Position
complement(220025..221167)
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AA seq
380 aa
AA seq
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MNFNIKMDDSKISIDLTDTRLKNVLQYCKPKEQLVLVRKFGLLTGGKEVPLQRIGKDYNL
TRERVRQIEAQALMRVRRLMVGNATYIDLIEDAKKILKEEGGILVEDAMITKIINLKKYE
FSRQEIKLILVSDFDVTYLKRNKNFNKCFYIDPLFEDFLTILALYTKDYFSQRAKSVDIY
EFALHLKDNFVKQYDQISFLKNDQFYLNFFESLRDMKMFDGKLGTPDFVDVYPKTIKLKI
LYTMRRYNKPVHFQELPAKIMDHFPEKNIKVNTVHNELVKNNDYFVNLGLGLYGLKEWGF
KGGTVVDIIVRIFQQHQRPMSVKEISKELLKEKMVSPNTILLNLQKYKGLFERTDKGVYQ
LQDKYMTISEEELREYVKSL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaatattaaaatggatgatagtaagatttcaattgatcttacagatactcgt
ctgaaaaatgtgttgcaatactgtaagccaaaagaacagcttgttttggtaagaaaattt
ggacttttgacaggttgaaaagaagtgccacttcaaagaattggtaaagattacaatctt
acaagagaaagagttagacaaattgaagcgcaagctctcatgagagtgagaagacttatg
gttggaaatgctacctatattgatcttattgaagatgctaaaaaaattctgaaagaagaa
tgatgaatcttggtagaagatgctatgattactaagattattaatctcaaaaaatatgaa
ttctctagacaagagattaaacttattttagtttctgattttgatgtaacatatctcaag
agaaataaaaattttaataaatgtttttatattgatcctctatttgaagactttttaact
atattggcattatacacgaaagattactttagccagagagcaaaaagtgtagatatttat
gaatttgctcttcatcttaaggataattttgtgaaacaatatgatcaaatttcattctta
aaaaatgatcaattttatcttaatttctttgagtctttaagagatatgaagatgtttgat
ggaaaacttggtacgcctgactttgttgacgtttatcctaaaacgattaagttgaaaata
ctctatacgatgagaagatataataaaccagtacatttccaagaattgcctgcaaaaatt
atggatcactttccagaaaagaatatcaaagtaaatacagttcataatgaattagtaaaa
aataatgactactttgttaaccttggacttggattgtatggtttgaaggaatggtgattt
aagggatgaactgttgtggatattattgtacgtattttccaacaacaccaaagacctatg
tcagtaaaggaaatctctaaagaacttttgaaagaaaaaatggtgagtccaaatactatt
cttcttaatcttcaaaaatataaatgactttttgaaagaactgataagggagtttatcag
ttacaagataaatatatgactatttctgaagaagaattaagagagtatgtaaaatcatta
taa
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