Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00741
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Entry
XF24_00741 CDS
T04487
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srg03016
]
XF24_00741
Enzymes [BR:
srg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XF24_00741
Transfer RNA biogenesis [BR:
srg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XF24_00741
Prokaryotic type
XF24_00741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKH33067
UniProt:
A0A288GU03
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All DBs
Position
complement(765008..766039)
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AA seq
343 aa
AA seq
DB search
MLFKNRYVDFVVEENLSFPLSKEHKDKSPWLYVKIEKRNLNTMDVVKQVMKKFGLPRKKI
GIAGLKDKHALARQRLCFHSSDVAKIGDQTFLKSLQEITKVIDFGFAPNALNLSTEITNS
FWIRLRKDPKNREKKAVKQSLADPKNKNKGMIDTTAIKGANIANEYLEQRLKKLYTQGFL
NLYGEQRFGFTHANHRIAQELIEGKKKNLDKSEVVFKLQSLASWLFNNYCTYRETKYGLK
EIEGDIIENNQITGPVFGDDMTWADPKTEAGKLEKERKEHFDLDKKTLEAFKKVGLFGRR
RPIRVKPTKASHSRQGDDLLLQFTLPKGCYASVLVEELLGEQE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcaaaaatcgttatgtcgacttcgttgtcgaagaaaatctttcttttccctta
agtaaagagcacaaagataagagtccttggctctacgtgaagatcgaaaaaagaaacctt
aataccatggatgtggtgaaacaagtgatgaagaaattttgactaccaagaaaaaaaata
ggaattgcctgactgaaagataagcatgctcttgcccgtcagcgattatgttttcatagc
tcagatgtagcaaaaattggagaccaaaccttcctcaaatctcttcaagagattacgaaa
gtaattgattttggatttgcacccaatgcactgaatctttcaaccgaaatcacgaatagt
ttttggattagattacgtaaagaccccaaaaacagagaaaaaaaagcagtcaaacaatca
ctcgctgatccaaaaaacaaaaacaaaggtatgattgatacaactgcgattaaaggagca
aatatagctaatgaatatctagaacagagactgaagaaactctatacacaaggatttctc
aatctctacggtgaacaaagattttgatttactcatgctaaccaccgtatagcacaagag
cttatcgaaggcaagaaaaagaatctggacaaatccgaagttgtcttcaagctccaaagt
ttggcaagttggctcttcaacaactactgtacctatagagaaaccaaatacggactaaaa
gaaattgaaggtgacatcatcgaaaacaatcagattactggtcctgtatttggcgatgat
atgacctgggctgatccgaagacagaagctggaaagttagaaaaagaacgaaaagaacat
ttcgacttggataaaaaaacactcgaagcattcaaaaaagtgtgattattctgacgccgt
agaccgatacgagtgaaaccaacgaaagcatcacattcacgacaaggagacgacctcctc
cttcaatttacccttcctaaaggatgctacgctagtgtattagttgaagaattattggga
gaacaagaataa
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