Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00957
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Entry
XF24_00957 CDS
T04487
Name
(GenBank) coproporphyrinogen III oxidase
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srg03016
]
XF24_00957
Enzymes [BR:
srg01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
XF24_00957
Transfer RNA biogenesis [BR:
srg03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
XF24_00957
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
ELP3_N
eRF1_2
KIAA0319_N
Motif
Other DBs
NCBI-ProteinID:
AKH33280
LinkDB
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Position
complement(978170..980047)
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AA seq
625 aa
AA seq
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MTLEQLVLALLQTPNLNKDHVSSLKREYARINKISGLPSNMQMLKTYHDLVQSGQASEHK
VFQQLLKKRAIRSQSGIVSVQVLTKPFWCPGECIFCPNDFTMPKSYINTEPGAMRALLNN
FDPVKQVYNRLLSLHLTGHDTDKIEMIVLGGTWDVYPTEYKKEFIKGLYDACNTFSEFLK
TVKLTHNANKSLFAIEDTLDKTEDSVQSLVAKSTTDTKEFPDTVEESIRINETAEHRMIG
LTVETRPEYVTDENCQLWRELGITRLEMGIQSTNDTVLDLNKRGHSVEQCKAACHKLRQY
GFKFSVHLMPGLYGSDEEKDLQTFIDIYSDPAFRPDEIKFYPTSVIPNTELYELYKKGEY
KPIETESIQRIITTTFRDIIPPYTRIKRLIRDIPSTEIAAGSSITNLAQLMHEGLYKQWR
NTDIIRHIYSRLYEHTTYYDTVEDFLSSIVNQVLPDSHSITSIIGGTIDAESDRAFVSLD
TRSREIRHRRSHEPEDIRIVIRAYRSSVGKEYFIAMETSQGYLYGFTRLLLPDIGKTVDY
DGLGEGTALIRELHVYGQVAKINSQDNTHTTQHTGVGRTVMTIAEQISQQAGYHRLSVIA
GVGVKEYYRNILGYHNDGTYVVKKL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaacaactggttcttgctcttttgcagacaccgaacttgaataaagatcat
gtgagttcactcaagagagaatatgcaaggattaataaaatatcatgactcccaagtaat
atgcagatgctcaagacataccatgatttagtgcagtcgtgacaagcatcagaacataaa
gtttttcaacaactactcaaaaaaagagctatcagaagccagtcaggtattgtttcagta
caagtactaacgaaaccgttttggtgtccaggagagtgtatcttctgtccgaatgatttt
accatgccaaagagttatatcaatactgaacctggagcgatgagagccttattaaataat
ttcgatccagtcaaacaagtttataatcgtctcctttctcttcatctgactgggcacgat
actgataagatagaaatgattgtccttggtgggacatgggatgtttatcctaccgaatac
aaaaaagaattcatcaaatgattgtatgatgcttgtaatactttttcagaatttcttaag
acagttaaactcactcataatgctaataaaagtctctttgctatagaagataccctggat
aaaactgaagattccgtacaatcgttagttgcgaaaagcacaacagatacaaaagaattt
cctgacacggttgaagaatcaatccgtatcaatgaaacagctgaacatcgtatgattggg
cttaccgtagaaacaagaccagagtatgtaactgatgaaaattgtcaactttggagagaa
cttggtattactagattagagatgggtattcaatcaacgaatgatactgtcttagatttg
aacaagagaggtcatagtgtagaacaatgtaaagcagcttgccacaagcttagacaatat
ggatttaaattttccgtgcatttgatgccaggactctacgggtctgatgaagaaaaagac
ttacagaccttcattgatatttactcagatcctgcatttcgtcctgatgagattaagttt
taccctacttctgttatcccaaatacagaactctatgaattgtataaaaaaggagaatat
aaacctattgaaactgaatctatccagagaattattactactaccttccgtgacattatt
ccaccttatactcgtatcaagagacttattcgtgatatcccttctacagaaatagctgct
ggttcatctattactaatctcgctcaactgatgcatgagtgactctacaaacaatggaga
aatactgatatcattcgccatatctattcaagattatatgaacatactacttattatgat
acggtagaagatttcttatctagcattgtaaatcaagtgctacctgatagtcatagtatt
acatcgattataggatgaactatcgatgcggagtcagatagagcgtttgtatcacttgat
actcgtagcagagaaattcgtcatagaagatcgcatgaaccagaagatattcgtatcgtc
atacgtgcgtatagaagttctgttgggaaagaatattttatcgctatggagacatcacaa
tgatatctctatggattcacgagattattactcccagatatatgaaaaacagtagattat
gactgacttggtgaaggtacagcattgattcgtgaacttcatgtctacggacaagtagcg
aagatcaatagtcaagataatactcatactacacaacatactggtgtgggacgtactgtg
atgactattgcagaacagatttcacaacaagcgtgatatcatcgtctctcagtgattgcc
tgagtaggtgttaaagaatattatcgcaatattctttgatatcataatgatgggacttat
gtggtgaaaaaattataa
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