Candidate division SR1 bacterium Aalborg_AAW-1: XF24_01021
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Entry
XF24_01021 CDS
T04487
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srg03016
]
XF24_01021 (truB)
Enzymes [BR:
srg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XF24_01021 (truB)
Transfer RNA biogenesis [BR:
srg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XF24_01021 (truB)
Prokaryotic type
XF24_01021 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKH33344
UniProt:
A0A288GW16
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All DBs
Position
complement(1033911..1034660)
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AA seq
249 aa
AA seq
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MLLLIHKPSGITSHDAISAVKKYLRQPARDALTEQEKSAGIKPPKIKIGHAGTLDPLASG
LMIAATDKDTKLLHSLTGSDKTYETTIDFSQRSDTRDLDYRKLLEPIDPSMYEDIPPLSQ
IEEILDTLIGTPSLPLTPFSAKKFEGKKLYEYAREGKPIFLTIPMTIYGYKVLDYQFPLL
KLKLHVGSGTYIRSIGHWLGTQIGGDAILISLKRISIGDHSLDFFEQKTIHIAQWDDKKI
EYVILGDII
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgctccttcttatccataaaccatcaggcattacctctcacgatgctatatcagcagta
aaaaaatatcttagacaaccagctcgagatgcgctaactgaacaagaaaaatctgcaggt
atcaaaccaccaaagatcaaaatctgacatgcggggactctcgatccactagcatcaggt
cttatgattgctgcgactgataaggatacaaaactccttcactcgctgactggttctgat
aagacatatgagacgacgatcgatttttcacaacgtagtgatacgcgagatcttgattat
cgaaaactcctagagcctatcgatccctccatgtatgaggatattcctccacttagtcag
attgaagaaattttggatacccttattggtactccaagtttaccactgacaccgttttct
gctaagaagtttgaaggtaagaaactctacgaatatgcaagggagtgaaaaccaatcttt
ttgactatccccatgaccatctacggatacaaagtgctcgactatcagtttcctctgtta
aaactcaaacttcatgttggatcagggacctatattagatcaatatgacattggcttggt
actcagataggatgagatgcaattttaatctcactgaaaagaatctctatcggagaccat
tctttagattttttcgaacaaaaaaccatccacatagcacagtgggatgataaaaaaata
gaatatgttatattaggtgatattatataa
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