Stenotrophomonas rhizophila: BAY15_0050
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Entry
BAY15_0050 CDS
T04500
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BAY15_0050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
DUF11
CarboxypepD_reg
SpaA
CarbopepD_reg_2
DUF7507
bMG3
EMC7_beta-sandw
TRAP_beta
CARDB
DUF1416
Motif
Other DBs
NCBI-ProteinID:
AOA70484
LinkDB
All DBs
Position
complement(58537..68076)
Genome browser
AA seq
3179 aa
AA seq
DB search
MSIQSDRAGICAAATPFERTQAQSWRLSLRRALLALVMVLPLPALAIDLQITDFSDTGYD
PVPAGTTVIYNVKVENGANDTASGSVTLFDLPAGTALGGTAPAGCSASAGAAGTTRVVCT
NPALNASTAPYEFKLPVTTIASQPATITVRAAIGFANALPPATTPISTLQNTDPFFGSDT
NVANNRTSQNTTIQAAADLELSKSATPDPVIGGGEITYTLTVRNAGPSVTTGFRVADTLP
PNVTLVGAPTGADWAFTQQNGTYNGTLAVGASTSYSFRGKVNVGTGNIVNSAVVNAGNVP
DPVPDNNAAQVTTQVTAGADLLVSKSVSPAPAAAGSVVTYTLTARNDGPSAATTVVLRDA
LPEGFIVNGVSGPGGWSCSNNAERTVVTCNAASFAPGAQAQIAIQAQVPSTGTNSSGTVT
NTAQISAATPDPVLTNNQGSVGLTVIPDGADLRMTKTKTPALVPVWNNTGLRTDSVMTST
LRAQNLGPRTVTGNLQLVDTLAAGEEWVDASGQPYAAGVPVTVGGFSCSVDRAWSGAPAQ
VVTCTQTGGYPVAVNGNSAALTLYTLARLQGSLANTACTGGSGGSAEPTTAGGINLDPNT
GNDCTGGQSRATDARADLSITKRTNGAGDADNVIREADGGVSYTLQVTNNGATTTGVVVN
DPIPGFVTGSTTVTKNTVPAGWTCDVVGSGYICRSAGTALAAGATATIVFTVNRGLFDSQ
SQAAGTCGGVAMPAGRFCNTAGVSVDPTVSGSIGEANPGNNSASDWVQIDPVANMATTAK
DITSGSPGRAGVNTTYRITYQNRGPSTARGVVFSDTFTLPANDAGFVLISAVRTGSGSTA
CSVTSNDAAISSASAPGGTSWFNTGGAPATLRLTCAPQDMANNSTQTMTVVIRPNVNSGN
TGRRFTNDGSFHFDPDNTGSPVPASGVDGSGRSYNYNSRTDDDLRAAALDFTAGEVDLIV
NKIDQNFDGAVDPLGYDSRVGQEANNYITYQVSVRNDGPSLATRTVIEDTITPASGANVA
FVGSRTGTNTTPQGAMEAPGVRCTVAPGSSNPTTAPQTLSCSMPSVGVSTTEQGAIAANQ
TSYLYLVYQYLSAPPATGATLLNAVTARSAETERDTSNNSAVQETSIRTRSDLAMTKTSV
VLAPNANPTQPLPAAATTISLRQPFWYVLDVVNNGPGHSLSRDRSGDNPLRGDGVVVTDT
LPAGLEVIGGGEGTSWQKAGNTADAGVVSNGTGSCVVNGRNLTCRMGDLALDGRVRVLVP
ARWTTLPANGAGLNTARATSDQLDPTPGNDEGTSTHTVVRSSLTGVVFQDRERSGTDGGT
PQAGEPTISGVEVRLTGTDAYGNAVTLTTTTDGNGAYRFDNLAPAGTDGYTLTQVQPAAY
VNGPVAPPVAGGLAPSAGGTYAVVDPAISANSLYTAVALGAGVDAVRYNFPEVRRPALSG
FVYVDSNYSNTRNTGDAPIANATVELLDAAGTVVASATTAADGSYSFPGLNPLQVYTLRE
VLPTGSYRNRPSAINPGLVGTAACAVCTVATGAAGDAATTDRIGNIDLSRGEDATAFNFG
EDAVTAISGHVYLDRNGNGDFDAGDAGTRNSQANGGLQGATVTLIGAGPDGAFGTGDDLP
PVVVQTDAQGRYDFDGLVVGQNYRITETQPQGYANAAENATNSITLNALPLTGSSGNDFG
EALGSLSGEVYEDFSNVAPNNNNGRRDAGENAIANVTVTLSGTDVLGNPVALTTTTDANG
GYRFSDLLPPQAGTGYTLTETQPAGYLDGKHAAGNAATPGSTAVANVISAIAINAGQDAS
GYLFGELANAPISGTVYLDRNDDGDNTAGDIGVPGVQVTIVGNGADGVFGTPDDTTVTLV
TNADGQYSYPGAIAGQAYRITETQPTGLGEGREQPGNVILIANLPAAGASGNDFGELAAS
LSGTVFLDRNNNGVQDAGEPGLPGVQLQLPAGTVDALGNAVVTVATDADGRYRFDHLLAG
TYSVTEQATQPSFNGGPTLNGLTRAGSIDGAIVGVSTAVASVPSAINAITLPAGKAGTAY
DFGEILPVSIAGAVFFDVDNDGVRNGAAETGIEAVTVQVNGTDDTGASASVSVQTGADGR
FVFEGLRPGTYTLVEPQQPAGTSNGITTAGTVGGTPRGTATPITTVPSAISTIDLTTPGS
ASVDNLFGEIPLNSGISGKVWTDRNNDGVVDPGETGLANVRVTLTGTDLAGNPISRDTVT
DADGSYSFAELPPGTYVVTEPEQPTGTRDGRTVAGSTGGSVTAPGTAPSQITALVLGVNQ
QSVNNNFGEIPTASIAGRVYNDSNDNGSVDSGEGGIAGVSVVLTGTDDLGQPVSLTLNTD
AEGRYRFEGLRPGTYTVTEPTQPPQTLNGITSAGTVNAALVGVASDRASVPSAISQIVLP
LGVDALEYNFGEIGDSPDLMVSKASTSTRFTVNNLAGYTIQVRNAGQQPSRGEYTVHDRL
PAGLSLDSLPVGTGWTCTGEPGATRFSCTSQRVLAAGAVSPDSIAVVVRVAAAAAEAGTV
NNAVLVEGGGENPFRAPTATERAAFEGEVGNLPACVDTIIHNACRVPNSVQLAASVGGTV
WFDVGSDDQLLDGGDRRLSAWIVELVDPANGQVVKTTVSAADGSYRFGDVVPGVKWNIRF
RDPRSTVLWPFPVTRETAGGVQEACDADAAIARGAVSACRTTDNGTSQLEVVLRAGDHLP
QQSLPVDPSGVVYDATTRDPVPGSIVTLAPVGLCSGYDPRTSVLNAAGGGYRIDGNTIAM
TVGSEGFYQFAFGPAAPARCEFQLTVTPPGGYTFVSSMIPPQASALSPAGGAGANHVVQA
NTQAPTGAVGTATEYYLTLFAGSATAAIVHNHLPLDTAVATGLAITKTGDRQTAEIGDTV
QYTVTVRQTAGSALAALNVIDRLPRGFTYIDGTARADGRAVADPAGKPGPLLGFALGPIT
VGGQIVLTYRVRVGVGAQQGDGINRAQAHGCSISGGCIDPMAVTPLPGSLASNRAEYRVR
VTGGVFTEQACVLGKVFMDCNNNHVQDREELGIPGVRLYFSDGTWVISDSEGKYSFCGLP
PQSHTLKVDASTLPVGARLTTSSNRNLGDADSLLLDLKNGELHRADFIEGSCANPVLEQV
KARRTQGEVQAPETEPGQAPLRFESKPARAPQQATDTANQRPIVHPRATPPAAATEGQP
NT seq
9540 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccagagcgatcgcgcaggtatctgcgcggcggcaacgccgtttgagcgcacg
caggcgcagtcctggcggttgtcgctgcgccgcgccctgctggccctggtgatggtgctg
ccactgcccgcactggccatcgacctgcagatcaccgacttctccgacaccggttacgac
ccggtgccggccggcaccacggtgatctacaacgtcaaggtcgaaaacggcgccaacgac
accgccagcggcagcgtgaccctgttcgacctgcccgccggcaccgcgctgggcggcacc
gccccggcgggctgcagcgcctcggcgggcgctgccggcaccacccgcgtggtgtgcacg
aacccggcattgaatgcttccacggcgccctacgaattcaagctgccggtcaccaccatc
gcctcgcagccggccaccatcaccgtgcgcgccgcgatcggcttcgccaacgcgctgccg
ccggcgaccacgccgatcagcacgctgcagaacaccgacccgttcttcggcagcgatacc
aacgttgccaacaaccgcaccagccagaacaccaccatccaggcggcggccgacctggaa
ctcagcaagagcgccacgcccgatccggtgatcggcggcggcgaaatcacctataccctg
accgtgcgcaacgccggccccagcgtcaccaccggcttccgggtggccgatacgctgccg
ccgaatgtcaccctggtcggcgcgccgaccggtgcggactgggccttcacccagcagaac
ggcacctacaacggcaccctggcggtaggcgcgagcaccagctattcgttccgcggcaag
gtcaatgtcggcaccggcaacatcgtcaattcggcggtggtcaacgccggcaacgtgccc
gacccggtgccggacaacaacgctgcccaggtgaccacgcaggtgactgccggtgcggac
ctgctggtgtccaagtcggtatcgcccgcgccggcagccgccggttcggtggtcacctat
acgctgaccgcgcgcaacgatggtcccagtgccgccaccacggtggttctgcgcgatgcg
ctgccggaaggtttcatcgtcaacggggtatccggacccggcggctggtcgtgcagcaac
aacgccgagcgcaccgtggtcacctgcaacgccgcaagcttcgcaccgggcgcgcaggcg
cagatcgcgatccaggcgcaggtgccgtccaccggcaccaacagcagcggtacggtgacc
aacacggcccagatcagcgcggccacgccggatccggtgctcaccaacaaccagggcagc
gtcggcctgaccgtcatccccgacggcgccgacctgcgcatgaccaagaccaagacgccg
gcgctggtaccggtgtggaacaacaccggcctgcgcaccgacagcgtgatgaccagcacc
ctgcgcgcgcagaacctgggcccgcgcacggtcaccggcaacctgcagctggtcgatacg
cttgccgcgggcgaagagtgggtcgatgccagtgggcagccctacgcggcgggcgtgccc
gtgaccgtgggcggtttcagctgcagcgtggaccgcgcctggagcggggccccggcgcag
gtcgtcacctgcacccagactggtggctacccggttgcggtcaacggcaactccgccgcg
ctgaccctgtacacgcttgcgcgcctgcagggctcgctggccaataccgcctgtaccggc
ggcagcggcggttcggccgaaccgaccaccgccggtggcatcaacctggatccgaacacc
ggcaatgactgcaccggcgggcagagccgcgccaccgacgcccgcgccgacctgtccatc
accaagcgcaccaatggcgctggcgacgccgacaacgtgatccgggaagcggatggtggg
gtcagctacacgctgcaggtcaccaacaacggcgcaaccaccaccggcgtggtggtcaac
gaccccatcccgggctttgtcaccggcagcaccaccgtcaccaagaacaccgtgccggcc
ggctggacctgcgatgtggtcggcagcggttacatctgccgctccgccggcaccgcgctg
gcggccggcgccaccgccaccatcgtgttcaccgtcaaccgcggcctgttcgacagccag
agccaggcagctggtacctgcggtggcgtggcgatgccggccggccgcttctgcaacacc
gcaggcgtcagcgtcgatccgaccgtgagcgggtcgatcggcgaagccaacccgggcaac
aacagcgcctcggactgggtgcagatcgacccggtggccaacatggcaaccactgccaag
gacatcacctccggcagcccgggccgcgctggcgtgaacaccacctaccgcatcacctac
cagaaccggggtccgtccacggcccgcggtgtggtgttcagcgataccttcaccctgccg
gccaatgacgccggttttgtattgatttcggcggtgcgcaccggcagcggcagcaccgcg
tgcagcgtgacctccaacgatgcggcgatcagctcggcgtccgccccgggcggcacctcg
tggttcaacaccggcggcgcgcccgccacgctgcggctgacctgtgcgccgcaggacatg
gccaacaactccacccagaccatgacggtggtgatccgcccgaacgtcaacagcggtaat
acgggccgccgtttcaccaacgatggctcgttccatttcgatccggacaacaccggcagc
ccggtaccggccagcggcgtcgacggcagcgggcgcagctacaactacaacagccgcacc
gacgatgacctgcgtgccgccgcgctggatttcaccgccggtgaagtcgacctgatcgtc
aacaagatcgaccagaacttcgatggcgcagtggatccgctgggctacgactcgcgtgtc
gggcaggaagccaacaactacatcacctaccaggtgagcgtgcgcaacgatggcccatca
ctggccacccgcaccgtgattgaagacaccatcacccccgcgagcggggccaacgtggcc
ttcgtaggcagtcgcaccggcaccaacaccacgccgcagggcgcgatggaagcaccgggt
gtccgctgtacggttgccccgggcagcagcaaccccaccacggcgccgcagaccctgtcg
tgcagcatgcccagcgtgggcgtgtccaccaccgagcagggcgcgatcgccgccaaccag
acgagctacctgtacctggtgtaccagtatctcagcgcgccgccggccaccggcgcgacg
ctgttgaacgcggtcaccgcacgctcggccgaaaccgagcgcgataccagcaacaacagc
gcggtgcaggaaaccagcatccgcacgcgctcggatctggcaatgaccaagaccagcgtg
gtgctggcgcccaatgccaacccgacccagccgctgcccgccgctgccaccacgatcagc
ctgcgccagccgttctggtacgtgctggacgtggtcaacaatggccccggccacagcctg
tcgcgcgaccgcagcggcgacaatccactgcgcggcgatggcgtggtggtcaccgatacg
ctgccggcaggtctggaggtgatcggcggcggcgaaggcaccagctggcagaaggccggc
aacaccgctgacgccggcgtggtcagcaacggcaccggcagctgcgtggtgaacggtcgc
aaccttacctgccgcatgggcgacctggcgctggacggccgcgtccgcgtgctggtgccc
gcgcgctggaccacgctgccggccaatggcgccggcctcaacaccgcacgcgccaccagc
gaccagctcgacccgacccccggcaatgacgaaggcaccagcacccacaccgtggtgcgg
tcctcgctgaccggcgtggtgttccaggaccgcgagcgcagcggcacggatggcggcacg
ccgcaggccggcgaaccgaccatttccggcgtggaagtgcgcctcaccggcaccgatgcc
tacggcaacgcggtgacgctcaccaccaccaccgacggcaacggtgcctaccgcttcgac
aacctcgcaccggccgggaccgacggctacacgctgacccaggtgcagccggccgcctac
gtcaatggcccggtggcaccgcccgttgcgggcggcctggcgccgtcggccggcggtacc
tatgccgtggtcgatccggcgatcagcgccaactcgctctataccgccgtcgcgctgggc
gcgggcgtggacgcggtgcgctacaacttcccggaagtgcgccgcccggcgttgtccggc
tttgtctacgtcgacagcaactacagcaacacccgcaacaccggcgacgccccgattgcc
aatgccaccgtcgaactgctcgatgcggccggcaccgtggtggccagtgccaccaccgcc
gccgacggcagctacagcttccccggcctgaacccgttgcaggtgtacacgctgcgcgaa
gtgctgcccaccggcagctaccgcaaccgcccgagcgcgatcaatccgggcctggtgggt
actgcggcgtgcgcagtttgcaccgtggccaccggcgcggccggcgatgcggcaaccacc
gaccggatcggcaacatcgacctctcgcgcggcgaagatgccactgcgttcaacttcggc
gaagacgcggtcaccgccatctccgggcatgtgtacctggaccgcaacggcaacggcgac
ttcgatgcgggcgatgccggtacgcgcaattcgcaggccaatggcggcctgcagggcgcc
accgtcaccctcatcggcgcgggccccgacggcgcgttcggtacgggcgatgacctgcca
ccggtggtggtccagaccgacgcgcagggccgctacgatttcgatggcctggtggtcggg
cagaactaccgcatcactgagacgcagccgcaggggtatgcgaacgccgccgaaaacgcg
accaacagcatcaccctcaacgcgctgccgttgaccggttccagtggcaacgatttcggc
gaggcgctcggttcgctcagcggcgaggtctacgaagacttctccaacgtggcgcccaac
aacaacaacggccgccgcgacgccggtgaaaacgccatcgccaacgtcaccgtgaccctg
tcgggcacggacgtgcttggcaatccggtcgcgctgaccaccaccaccgatgccaacggc
ggctaccgcttcagtgacctgttgccgccgcaggccggcaccggctacaccctgaccgaa
acgcagccggccggttacctggacggcaagcatgcggccggcaatgcggccacccccggc
agcacggccgtggccaacgtcatttccgcgatcgccatcaacgccgggcaggacgccagc
ggctacctctttggcgaactggccaatgcgccgatcagcggcacggtgtacctggaccgc
aacgacgacggcgacaacaccgccggcgacatcggcgtacccggcgtgcaggtgaccatc
gtcggcaatggcgccgacggcgtgttcggcacgcccgacgacaccaccgtcaccctggtc
accaatgccgatggccagtacagctaccctggcgcgatcgccggccaggcctaccgcatc
accgaaacccagccgaccgggctgggcgaaggccgcgagcagccgggcaatgtcatcctg
atcgccaacctgcccgccgccggcgccagcggcaacgatttcggcgagctggccgcgtcg
ctgtccggcaccgtgttcctggaccgcaacaacaacggcgtgcaggacgccggcgagccg
ggcctgccgggcgtgcagctgcagctgccggccggcacggtcgacgcgctgggcaacgcc
gtggttaccgtggcgaccgatgccgacggtcgctaccgcttcgaccacctgctggccggc
acctacagcgtgaccgagcaggccacgcagccgtcgttcaatggcggcccgaccctcaac
ggcctcacccgtgcgggcagcatcgacggcgccatcgtgggcgtgtccaccgccgtggcc
agcgtgccgagcgcgatcaacgcgatcacgctgccggccggcaaggcagggaccgcctat
gacttcggcgagatcctgccggtgtccatcgccggcgcggtgttcttcgatgtcgacaac
gacggcgtgcgcaacggtgccgctgaaaccggcatcgaagcggtgactgtgcaggtcaac
ggcaccgacgacaccggcgccagcgcctcggtcagcgtacagaccggtgccgatggccgc
ttcgtgttcgaaggccttcgcccgggcacctacacgcttgttgaaccgcagcagccggcc
ggcaccagcaacggcatcaccaccgccggcaccgtgggcggcacgccgcgtggcaccgcc
acgccgatcaccaccgtgcccagtgcgatcagcaccatcgacctgaccacgccgggcagc
gcctcggtggacaacctgttcggcgaaattccgctcaacagcggcatcagcggcaaggtc
tggaccgaccgcaacaatgacggcgtggtcgacccgggcgaaaccggcctggccaatgtg
cgggtcaccctgaccggcaccgacctggccggcaatccgatcagccgcgataccgtgacc
gacgcggacggtagctacagcttcgccgaactgccgccgggcacctacgtcgtgaccgaa
ccggagcagcccaccggcacccgcgatggccgcaccgtggccggcagcaccggtggcagc
gtgaccgcgccgggcacggcgccttcgcagatcactgcgctggtgctgggcgtgaaccag
cagtcggtgaacaacaactttggtgagattccgaccgccagcattgccggccgcgtctac
aacgacagtaacgacaacggcagcgtcgacagcggcgaaggcggcattgccggggtcagc
gtggtgctgaccggcaccgatgaccttggccagccggtatcgctcacgttgaacaccgat
gccgaaggccgctaccgcttcgagggcctgcgcccgggcacctacaccgtgaccgagccg
acccagccgccgcagacgctcaacggcattaccagcgccggcaccgtcaacgccgccctg
gtcggtgtggccagtgaccgcgccagcgtgccgtcggcgatcagccagatcgtgctgccg
ctgggcgtggacgcgctggagtacaacttcggtgagatcggcgattcgcccgacctgatg
gtcagcaaggcgtccaccagcacgcgcttcacggtcaacaacctggccggttacaccatc
caggtgcgcaacgccggccaacagccgagccgtggcgagtacacggtgcacgaccgcctg
ccggcgggcctgagcctggacagcctgccggtggggaccggctggacctgcaccggcgaa
cccggcgcaacccgtttcagctgcaccagccagcgcgtgctggccgccggtgcggtatcg
ccggacagcatcgccgtggtggtacgtgtggccgcagcagcggccgaggccggcacagtc
aacaatgccgtgctggtggaaggcggcggcgagaacccgttccgcgccccgaccgcaacc
gaacgcgctgcgttcgagggcgaagtgggcaacctgccggcgtgcgtggacaccatcatc
cacaacgcctgccgcgtgcccaacagcgtgcagctggccgcgtcggtcggtggcaccgtg
tggttcgacgtgggcagcgatgaccagctgctggatggcggcgaccgtcgtctgtcggct
tggatcgtggagctggtggaccccgccaacggccaagtggtgaagaccaccgtgagtgcg
gccgatggcagctaccgcttcggcgatgtggtgccaggcgtgaagtggaacatccgcttc
cgcgacccgcgctccaccgtactgtggccgttcccggtcacccgcgaaactgccggcggc
gtgcaggaagcctgcgacgccgacgcggcgatcgcgcgcggcgcggtcagtgcctgccgc
accaccgacaacggtaccagccagctggaagtggtgctgcgcgccggtgaccacctgccg
cagcagagcctgccggtagacccatcgggcgtggtgtacgacgccaccacccgcgacccg
gtaccgggttcgatcgtgaccctggcgccggttggcctgtgcagcgggtatgacccgcga
accagcgtgctcaatgcagccggtggtggctatcgcattgacggcaacacgattgcgatg
accgttggcagcgaaggcttctaccagttcgcgtttggtccggcggcgccggcacgttgc
gagttccagttgacggtgactccgccgggtggctacaccttcgtgtcgagcatgatcccg
ccgcaggccagcgcgttgtcgccggccggcggtgccggtgccaaccatgtcgtgcaggcc
aacacccaggcgccgaccggcgcggtgggtacggcgaccgagtactacctgaccctgttc
gcgggttcggccaccgcagcgatcgtgcacaaccatctgccgctggatacggcggtggcc
accggcctggcgatcaccaagaccggcgaccgccagaccgccgaaatcggcgacaccgtg
cagtacaccgtcaccgtgcgccagaccgccggcagtgcgctggccgcgttgaacgtgatc
gaccgcctgccgcgtggcttcacctacatcgacggcaccgcgcgtgccgacggccgtgcg
gtggccgacccggccggcaagcccggcccgctgctgggcttcgcgctggggccgatcact
gtcggcggccagatcgtgctgacctaccgggtccgcgtgggcgtgggcgcgcagcagggc
gacggcatcaaccgggcgcaggcccatggctgttcgatcagcggcggttgcatcgacccg
atggcggtcaccccgctgcccggttcgctggcctccaaccgtgccgaataccgcgtgcgt
gtcaccggtggcgtgttcaccgaacaggcctgtgtgctcggcaaggtgttcatggactgc
aacaacaaccacgtgcaggaccgcgaagagctgggcattccgggagtgcgcctgtacttc
tccgacggcacctgggtgatcagcgattcggaaggcaagtacagcttctgcggcctgccg
ccgcagagccacacgctgaaggtggatgcgagcacgctgccggtcggcgcgcgcctgacc
accagcagcaaccgcaacctgggcgacgccgacagcctgctgctcgacctgaagaacggc
gagctgcaccgcgccgacttcatcgaaggcagctgcgccaacccggtgctggagcaggtc
aaggcacgtcgcacccagggtgaggtgcaggcgccggaaaccgaaccgggccaggcgccg
ctgcgcttcgagagcaaacccgcacgggcgccgcagcaggcgaccgacacggccaaccag
agaccgatcgtgcatcccagagccacaccgcccgccgccgccacggagggccagccatga
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integrated database retrieval system
