Stenotrophomonas rhizophila: BAY15_0089
Help
Entry
BAY15_0089 CDS
T04500
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAY15_0089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_0089
Enzymes [BR:
srh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAY15_0089
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAY15_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
AOA70523
LinkDB
All DBs
Position
complement(131014..134358)
Genome browser
AA seq
1114 aa
AA seq
DB search
MTDPASDFRLYHSNSLDVLAALLARTLREPVAGQSILEPDVVLIPQVAMRRWLQSTLAAE
YGIAANLAFLTPGEFVARALNANVPGEHDDLTAAALHWKLYAALTDPLLMAQPPLRALQA
YLSQPDPLKPWALAGELASVFEKYQAWRRDWLLRWEAGADPLDPQAILWRHIGSGHQYRA
RRIHAYLDGFEGADRPLPAGLPPRLFAFATLNVSPDVLRVVATQARVGTLHFYLPTPTRS
YWGDLQTLGGRLRAGAVDPFGNGSDENRLLQAWGAAGRDFMAVLGSYEVVHPSGEIAAYD
DPEEDARPDMAHGGLSDSLLHRLQRDLFHRRAQPAGALRPGLLRNDPSLQVHACHTRLRE
LQVLHDQLRALLQDPRFDPPLQARDIAVLAPDIDPYVPYLEAVFGGRSGGEDHIPYALAD
TSPLTGEPLADVFVHLLGLPVSRFGLNEVLDLLASAPLAEAAGLDAAAFDRLHDWLQAAG
ARWGLSAAHRAQHQAPDDDAYTWQFALDRLLLGHASGSDGDIAGVAPWPELEGSALDALD
RLLGLMRVLARYQRALGEALTPAHWRQRLLAMLDALLPEAPEAASSQRALERLRKLVNEF
ARDAERAGFTGTVPPEVVRAHFAGALSEADTRAPLLTGGISFGRMVPMRLLPFRVICVLG
LNDGDFPRRDPAAGLNQLTAELGTDKRRHGDRSLREDDRFLFLQLFASAQDVFYLSYLGA
DPRDGSVREPSVLVSELIDAAAEYHEDPSAAAKQLTVRHSLQPFSPAAFGGGDEPRRFSY
RQQWHPAAGSLGRVRRAPPAWFEQALAPLEQEGMPELSLDALRRFLVDPAGQFLSQRLGL
RLPDDLTTADDLEPLVLAGRGLEQRLLQHAVIEATLQGDDTPLYARLRARALLPSGALGE
RQFQALQEQTRPYALALAQWRGDSDADSRRYEVEIDGVRLHGRVDDIHPQGIVRLRAGSL
NGPAAIRHGLDWLLANAAGDALALVEFHDGGDDGVGPHVLPAVPAPAARAALQALLQLRR
DGMRAPLLYGPYTAWTLYRAPAAKRESEGWAQWHGGERRWGEASGDAVQLALRGRDPFAD
ADSYQQLLHTSFVVFSAVREGRVFQGFSDEGAVA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccgcttcagacttccgcctgtaccactccaattcgctggacgtgctggcc
gcgctgctggcccgcaccctgcgcgagccggtggcggggcagtcgatcctggagccggac
gtggtgctgattccccaagtggcgatgcggcgctggctgcagtccaccctggcggcggag
tatggcatcgccgccaacctggcgttcctgaccccgggcgagttcgtggcccgcgcgctc
aatgccaatgtgccgggcgaacatgacgacctcactgccgccgcgctgcactggaagctg
tacgccgcgctgaccgacccgctgctgatggcgcagccgccgctgcgcgcgctgcaggcg
tacctgtcccagcccgacccgctcaagccgtgggcgctggccggggagctggcctcggtg
ttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgggaggccggcgccgac
ccgctggatccgcaggcgatcctgtggcgccacatcggcagcggccaccagtaccgcgcg
cgtcgcatccatgcttatctcgacggcttcgaaggcgcggaccgtccgttgccggcgggg
ctgccgccgcgtctgttcgccttcgccaccttgaacgtctcaccggatgtgctgcgcgtg
gtggccacccaggcgcgggtcggcacgctgcacttctacctgcccacgccgacgcgttcc
tactggggcgacctgcagaccctgggcgggcggctgcgcgctggcgcggttgatccgttc
ggcaatggcagtgatgagaaccgcctgctgcaggcctggggcgcggcagggcgcgacttc
atggcggtgctgggcagctatgaagtggtgcatccgtccggtgagatcgcggcctacgac
gatcccgaagaggacgcgcgcccggacatggcgcacggcggcctgtccgacagcctgctg
caccgcctgcagcgcgacctgttccaccgccgcgcgcaaccggccggtgcgttgcgcccg
gggctgctgcgcaacgaccccagcctgcaggtgcatgcctgccacacccgccttcgcgag
ctgcaggtgctgcacgaccagctgcgtgcactgctgcaggacccgcgcttcgatccgccg
ctgcaggcacgcgacatcgcggtgctggcaccggacatcgacccctacgtgccgtacctg
gaagcggtgttcggcggccgcagcggtggcgaagaccacattccctacgccctggccgat
accagtccgctgaccggcgaaccactcgccgatgtgttcgtgcacctgctgggattgccg
gtgtcgcgctttggcctcaatgaagtgctggacctgctggcgagcgcgccgctggccgaa
gcggccgggctggatgcggccgcgttcgaccgcctgcacgactggctgcaggccgccggt
gcgcgctggggcttgagtgcggcgcaccgcgcgcagcaccaggcaccggacgatgatgcc
tacacctggcagttcgcgctggaccgcctgctgctgggccatgccagcggcagcgacggc
gacatcgccggggtggcgccgtggccggagctggaaggcagcgcactggatgcgctggac
cgcctgcttgggctgatgcgggtactggcccgttaccagcgcgcactgggcgaggcgctg
acaccggcgcactggcgccagcgcctgctggccatgctggatgcgctgttgcccgaagca
ccggaagcggccagcagccagcgcgcgctggaacggctgcgcaagctggtcaacgagttc
gcccgcgatgccgaacgcgccgggttcaccggtacggtaccgccagaggtcgtgcgcgca
catttcgccggcgccttgagcgaggccgacacgcgcgcgccgctgctcaccggtggcatc
agcttcgggcgcatggtgccgatgcggctgctgccgttccgggtgatctgcgtgctcggc
ctgaacgatggcgatttcccgcgccgcgacccggccgccgggctcaaccagctcactgcc
gaactgggtaccgacaagcgccgccacggcgaccgctcgctgcgcgaggacgaccgtttc
ctgttcctgcagctgttcgcctcggcgcaggatgtgttctacctgagctacctgggcgcc
gatccgcgcgatggcagcgtgcgcgagccctcggtgctggtcagcgagctgatcgatgcc
gccgccgaataccatgaggatccctcggcggcggcaaagcagctgaccgtgcgccattcg
ctgcagccattctcgccggccgccttcggtggcggcgatgagccgcgccgtttcagctac
cgccagcagtggcacccggccgccggttcgctgggccgcgtgcgtcgcgcgccgccggcg
tggttcgagcaggcgctggcgccgctggagcaggagggcatgcccgaactctcgctggac
gcgctgcgccgcttcctggtcgatcccgccgggcagttcctgtcgcagcggctgggcctg
cgcctgcccgatgacctgaccaccgccgacgaccttgagccactggtgctggccggccgg
ggactggagcaacgcctgcttcagcacgcggtgatcgaggcgaccctgcagggcgatgac
acccctctctatgcacgcctgcgcgcccgcgcgctgctgccgtccggcgcactgggcgaa
cgccagttccaggccctgcaggagcagacccgcccgtatgcgttggcactggcccaatgg
cgcggcgacagcgacgccgacagccgccgctatgaggtggagattgatggcgtgcgcctg
catgggcgggtggacgacatccacccgcaaggcatcgtgcgcctgcgcgcgggcagcttg
aacgggccggcggcgatccggcatgggctggactggctgctggccaacgccgccggcgat
gcgctggccctggtcgagttccacgacggcggcgacgacggggtagggccgcacgtgctg
ccggcagtgcccgcgcccgccgccagggcggcgctgcaggcgctgttgcagctgcgccgc
gacggcatgcgcgcgcccctgttgtatgggccgtacaccgcctggacgctgtaccgcgcg
cccgccgccaagcgcgaaagcgaaggctgggcgcaatggcatggcggcgaacgccggtgg
ggcgaagccagcggcgatgcggtgcagctggccctgcgcggccgcgatccgttcgccgac
gcagacagctatcaacagctgctgcacaccagcttcgtggtgttcagtgcggtccgagag
ggccgggtgttccagggcttcagcgacgaaggagccgtggcatga
DBGET
integrated database retrieval system
