KEGG   Stenotrophomonas rhizophila: BAY15_0149
Entry
BAY15_0149        CDS       T04500                                 
Name
(GenBank) Ku domain-containing protein
  KO
K10979  DNA end-binding protein Ku
Organism
srh  Stenotrophomonas rhizophila
Pathway
srh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:srh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BAY15_0149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srh03400]
    BAY15_0149
DNA repair and recombination proteins [BR:srh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BAY15_0149
SSDB
Motif
Pfam: Ku QueG_DUF1730
Other DBs
NCBI-ProteinID: AOA70583
UniProt: A0AAP5AKL9
LinkDB
Position
196204..197160
AA seq 318 aa
MARPIWTGTLSFGLLNVPVSLMSGERKTDLSFRMLDSRDRKPIRFERVNADTGEEVPWKD
IVKAYEYDKGSYVVLDEADIKSAAPESHETVEVESFVDASQIDPRYFEKPYLLVPGKKAE
KGYVLLRETLRSTGKVGIARVVVRTREYLCAVMPHEHALVLLILRYPQELVDPEEHKLPT
GSLADYRISSKETAMAEQLIESMSGEWKPDDYHDEFRERLQAVLTKRIKQKGGTTTVEDE
PAAPHDATTNVVDFMSLLQKSLDAKKRTPAKKTAVSKVVKKAAPAKKAAKTTKAATKATK
ATKATKKPAKSAPTRKAG
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcccgaccgatctggactggaaccctgtcattcgggctgctgaatgtgccggtgtcg
ctgatgtcgggcgagcgcaagaccgacctcagcttccgcatgctagattcacgcgaccgc
aagccgatccgcttcgagcgggtcaacgccgataccggcgaagaagtgccgtggaaggac
atcgtcaaggcttacgaatacgacaagggcagttatgtcgtgctggatgaggccgatatc
aaatcggccgcgccggaaagccacgaaaccgtggaagtggaaagcttcgtcgacgcaagc
cagatcgacccgcgctacttcgaaaagccctacctgctggtaccgggcaaaaaagccgag
aagggctacgtgctgctgcgcgaaaccctgcgcagcaccggcaaggtggggattgcccgc
gtggtggtgcgcacccgcgaatacctgtgcgcggtgatgccgcacgagcatgcgctggtg
ctgctcatcctgcgctacccgcaggagctggtggatcctgaagaacacaagctgcctacc
ggctcgctggccgactaccggatcagcagcaaggaaacggcgatggccgagcagctgatc
gaatcgatgtccggtgaatggaagccggacgactaccacgacgaattccgcgaacgcctg
caggcagtgctgaccaagcgcatcaaacagaagggcggcaccaccaccgtggaagacgag
ccggccgcgccgcatgacgccaccaccaacgtggtggacttcatgtcgctgctgcagaag
agcctggatgcgaagaaacggaccccggccaagaagacggcggtgtcgaaggtggtgaag
aaggcggcacctgcgaagaaggcagccaaaaccaccaaggcggcaaccaaggcgaccaaa
gccacgaaggcgacgaagaagcctgccaagagcgcgccgacgcgcaaggccgggtaa

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