Stenotrophomonas rhizophila: BAY15_0149
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Entry
BAY15_0149 CDS
T04500
Name
(GenBank) Ku domain-containing protein
KO
K10979
DNA end-binding protein Ku
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BAY15_0149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_0149
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BAY15_0149
BRITE hierarchy
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GFIT
Motif
Pfam:
Ku
QueG_DUF1730
Motif
Other DBs
NCBI-ProteinID:
AOA70583
UniProt:
A0AAP5AKL9
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All DBs
Position
196204..197160
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AA seq
318 aa
AA seq
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MARPIWTGTLSFGLLNVPVSLMSGERKTDLSFRMLDSRDRKPIRFERVNADTGEEVPWKD
IVKAYEYDKGSYVVLDEADIKSAAPESHETVEVESFVDASQIDPRYFEKPYLLVPGKKAE
KGYVLLRETLRSTGKVGIARVVVRTREYLCAVMPHEHALVLLILRYPQELVDPEEHKLPT
GSLADYRISSKETAMAEQLIESMSGEWKPDDYHDEFRERLQAVLTKRIKQKGGTTTVEDE
PAAPHDATTNVVDFMSLLQKSLDAKKRTPAKKTAVSKVVKKAAPAKKAAKTTKAATKATK
ATKATKKPAKSAPTRKAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaccgatctggactggaaccctgtcattcgggctgctgaatgtgccggtgtcg
ctgatgtcgggcgagcgcaagaccgacctcagcttccgcatgctagattcacgcgaccgc
aagccgatccgcttcgagcgggtcaacgccgataccggcgaagaagtgccgtggaaggac
atcgtcaaggcttacgaatacgacaagggcagttatgtcgtgctggatgaggccgatatc
aaatcggccgcgccggaaagccacgaaaccgtggaagtggaaagcttcgtcgacgcaagc
cagatcgacccgcgctacttcgaaaagccctacctgctggtaccgggcaaaaaagccgag
aagggctacgtgctgctgcgcgaaaccctgcgcagcaccggcaaggtggggattgcccgc
gtggtggtgcgcacccgcgaatacctgtgcgcggtgatgccgcacgagcatgcgctggtg
ctgctcatcctgcgctacccgcaggagctggtggatcctgaagaacacaagctgcctacc
ggctcgctggccgactaccggatcagcagcaaggaaacggcgatggccgagcagctgatc
gaatcgatgtccggtgaatggaagccggacgactaccacgacgaattccgcgaacgcctg
caggcagtgctgaccaagcgcatcaaacagaagggcggcaccaccaccgtggaagacgag
ccggccgcgccgcatgacgccaccaccaacgtggtggacttcatgtcgctgctgcagaag
agcctggatgcgaagaaacggaccccggccaagaagacggcggtgtcgaaggtggtgaag
aaggcggcacctgcgaagaaggcagccaaaaccaccaaggcggcaaccaaggcgaccaaa
gccacgaaggcgacgaagaagcctgccaagagcgcgccgacgcgcaaggccgggtaa
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integrated database retrieval system