Stenotrophomonas rhizophila: BAY15_0166
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Entry
BAY15_0166 CDS
T04500
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srh03000
]
BAY15_0166
Transcription factors [BR:
srh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BAY15_0166
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
MarR_2
HTH_23
HTH_Tnp_ISL3
HTH_36
HTH_3
HHH_5
HTH_7
HHH
HTH_24
HTH_IclR
HTH_26
DUF3853
HTH_Crp_2
AmiR_N
HTH_29
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AOA70600
LinkDB
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Position
219138..220196
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AA seq
352 aa
AA seq
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MSLRSKTDPPPHGLTKGKAATINDIARLSGVSKKTVSRIINNSPLVRKDTREKVETLMRE
VGYTPDPLARGLAFRRSFLIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSP
GYIEGVRRFVQQQKLHGVILVPRASEDQALVDMLDEIGCRFTRIAALPLDDTSQMVVTHD
RDGAAEAADYLLSLGHRDIALVTGPSAYRSAHERTAGFIDALAQRGIELPPGRIVEAGYT
FESGVAAAEKLLLGKQRPTAIFTGNDEMAAGIYKVALRAGINIPRQLSIIGYDDSPLASR
LWPSLTSVRRHTRDTGRTAAAMLVQPDGQAALQIASVRPHLIVRDSCQPPED
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcgcagcaagaccgacccgccaccgcacgggttgaccaagggcaaggccgcc
acgatcaatgacatcgcgcggctgtcgggtgtatccaagaaaacggtttcgcggatcatc
aacaactcgccactggtgcgcaaggacacccgtgagaaggtggaaacgctgatgcgcgag
gtgggctacacgcccgacccgctggcgcgcgggctggccttccgccgctcgttcctgatc
ggcatggtctacgacaaccccaccgcgcagtacatcgtggacatgcagtacggcgcgctg
gacgcgctgcgtgggtccagcttcgaactggtggtgcacccgtgcgattcgcgcagcccc
ggctacatcgaaggcgtgcgccgcttcgtgcagcagcagaagctgcacggtgtcatcctg
gtgccgcgtgcctcggaagaccaggcgctggtggacatgctcgatgagatcggctgccgc
ttcacccgcatcgctgcgctgccgctggatgacacctcgcagatggtggtgacccacgac
cgcgacggcgccgccgaagcggcagattacctgctgtcgctgggccaccgcgacatcgcg
ctggtcaccggccccagcgcctaccgatcggcgcacgagcgcaccgccggcttcatcgat
gccctcgcccagcgcggtatcgaactgccgcccgggcgcatcgtggaagccggctatacc
ttcgaatccggtgtggccgctgccgaaaagctgctgctgggcaagcagcgcccaaccgcg
atcttcaccggtaacgatgaaatggccgccggtatctacaaggtggcgctgcgcgcgggc
atcaacattccgcgccagctgtccatcatcggctacgacgacagcccgctggcctcgcgc
ctgtggccgtcgctgacctcggtgcgccgccacacccgcgacaccggccgcaccgccgcc
gcgatgctggtccagcccgacggccaggccgcgctgcagatcgccagcgtgcgcccgcac
ctgatcgtgcgcgattcgtgccaaccgccggaggactga
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