Stenotrophomonas rhizophila: BAY15_0206
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Entry
BAY15_0206 CDS
T04500
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srh03032
]
BAY15_0206
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_0206
Enzymes [BR:
srh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BAY15_0206
DNA replication proteins [BR:
srh03032
]
Prokaryotic type
DNA Topoisomerases
BAY15_0206
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BAY15_0206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOA70640
LinkDB
All DBs
Position
266173..267243
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AA seq
356 aa
AA seq
DB search
MPARLATPEATAARDAGLRYVTDELPGIARRRAGKGFSYRDADGHAVRDAATLARIRSLA
IPPAYTDVWICALANGHLQATGRDARRRKQYRYHPDWARVRGDGKFDRVIAFGEALPALR
RRLRRDLKLPGFPQDKVLAIVVALLAETLVRVGNPEYARDNRSYGLTTLRNRHLELVKGG
RARMRFRGKSGQQHEVDIDDTRLVGLIKGCQQLPGQALFQYRDDDGALQPVDSGQVNAYL
RDAMGTDFSAKDFRTWGGTVAALRHFAATALPETPSERALAALQKEVVCEVATLLGNTPS
VCRKAYIDPSVFDGWRSGSLARLAGLRGERQWEQATLKFLRSARRTVKKAKAGTAR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgccttgccacccccgaagccaccgcagcccgcgacgccggcctgcgctat
gtcaccgacgagctgcccggcatcgcccgccgccgcgccggcaagggcttcagctaccgc
gacgccgacggtcacgcggtccgcgacgctgccaccctggcccggatccgctcgctggcg
atcccccccgcatacaccgatgtgtggatctgcgcgctggccaacggccacctgcaggcg
accgggcgcgatgcccgccggcgcaagcagtaccgctaccacccggactgggcgcgggtg
cgcggcgatggcaagttcgaccgggtcatcgccttcggcgaggcgcttccggcgctgcgc
cgccgccttcgccgcgatctcaagctgcccggcttcccgcaggacaaggtgctggcgatc
gtggtcgcgctgctggccgaaaccctggtccgcgtgggcaaccccgagtacgcccgcgac
aaccgctcctacggcctgaccaccctgcgcaaccgccacctcgaactggtcaagggcggg
cgtgcgcgcatgcgcttccgtggcaagtcgggccagcagcatgaggtggacatcgacgac
acgcggctggtgggcctgatcaagggctgccagcagctgccggggcaggccctgttccag
taccgggatgatgacggcgcgctgcagccggtcgattcgggccaggtcaacgcctacctg
cgcgatgcgatgggcaccgatttcagcgccaaggacttccgcacctggggtggcacggtg
gccgcgctgcgccatttcgctgcaacggcgctgccggagacgcccagcgagcgcgcgctg
gccgcgctgcagaaggaagtggtgtgcgaggtggccaccctgctgggcaacaccccctcg
gtgtgccgcaaggcctacatcgatcccagcgtgttcgacggctggcgcagcgggtcgctg
gcgcggttggccggcctgcgcggcgagcggcaatgggagcaggcgacgctgaagttcctg
cgcagcgcgcggcgcacggtgaagaaggccaaggccgggaccgcgcgctga
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