Stenotrophomonas rhizophila: BAY15_0757
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Entry
BAY15_0757 CDS
T04500
Name
(GenBank) cell surface protein
KO
K21449
trimeric autotransporter adhesin
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srh02000
]
BAY15_0757
Transporters [BR:
srh02000
]
Other transporters
Pores ion channels [TC:
1
]
BAY15_0757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
ESPR
Motif
Other DBs
NCBI-ProteinID:
AOA71191
LinkDB
All DBs
Position
884519..893164
Genome browser
AA seq
2881 aa
AA seq
DB search
MNRIYRKVWNKALGQMVVASELASSQTPGVVIDQRRSSATRGGAVLSAAIALTLGLGMTG
AMSDAHAQSVEVGGNANCVVLNSNVIDSCVVDGNATASGANAVAIGSNSTASAANSVALG
AGSRAARANTVSVGDAGKERQVTNVAAGTAATDAVNKAQLDTVAATAASATRYFKADGEG
NDSDAARIEGEGALAAGASANADGDGATALGRNSQALANATTAVGSDAVAAGLGGSAFGQ
NSLAIGDATVAVGQSAMAFGLGDVALGASAFAASENGAATAIGGLAEASADGATAIGGGA
LAIGAGSTSLGRGAGSGGEASIAVGAFSTAVADFSAALGSNSAAVAVGSVALGAGSYADR
VDTVSVGNDNGLQRQITNVAAGTEAGDAVNKAQLDEVGEVAGTTAKYVQATGSADSDAGA
FADGDNATAVGEATNALGTGTTALGSGATAVAQNATAVGYNALASGQNSAAFGTNAQANG
PGSVAVGGTAVDEDGNPLITNGGVPVDTGATSAGVGGTAVGASAEAAGFAASSYGVGAYA
AGAQSSAFGAVANATGDYATAVGTQSAASGTSSTAIGGPVDLIPGLGFFVDTQASGEAAT
AVGAGAIASGDYAVANGTLSEASGTEATAVGYFAYAPGEGASALGAESWASGELSTAVGF
YSTARGANSVALGANSTAVRDNTVSVGDVGNERQITHVAAGTEATDAVNKAQLDAVAGTA
DGTAYRFKANGSQDSDVGAFADGDGALAAGEASNAIGAGATSVGNGASAVGDDTLAVGRN
VAATGNGSVAIGGVGQAYDQYNSPIVDADGNAVTVGTTAAQDAVAVGAGAQATGAQSNAY
GGGAQATGDNSLAQGYKSRATGEYSVAQGDNAFASGSESTATGAYAWATSDGATAFGSSA
WATEANATAVGYAAWADGSGATSIGYNSWARGNSATALGRGAFGYGDNSVAVGYQALGNS
INTIAIGTNVVAGGESAIGIGAGSNASAANAVALGAGARADRAYTVSVGNDDQQRQITQV
AAGTEGTDAVNVDQLTAATDKFQASGDGVAVVGGEESVAAGSNAATDGDYATAVGSSSFA
SGTGASAVGSGAFALADGATAVGLNALASAGNATAAGADAQATAEYATANGAESLASGEQ
STANGAASIASGAGSLASGALSEAAGEESVALGYYSTASGSGATAVGAESVVSGTLSAGY
GFASEATAGYTTAIGGYAAATAFNATALGSFAQATGSNSVALGGDAEATGAYSTATGQGS
LASGTNSVAIGGALFGLLPTEASGNYSTAVGGGAWSPGLNSTALGNAATSEGENSVALGA
DSIADRDDSVSVGSAGSERQVTNVAAGTEGTDAVNLDQLNAVADTAATTSKYFQASGSDA
SDAGAFVDGDDALAAGEASNAIGNGATALGAGSTVVANEATAVGFNATATADYAVAIGSN
AASSGQGAVALGDLSTASGGAAIAIGGGALSQGFGSVAVGAGAESSGLASTAVGYGAWAL
GRETTAIGNFATADGWAASAFGAGATAAFFGTAIGTYSYADEVATAVGQGTRANVAGAAF
GVQANAGEYGVALGNNAATAQNGVAVGFNALAGADANSSTQGIQTTAVGSEAWATEDGAT
VVGYNSYAQAVNSTVVGSNTWTTKDADNSVALGAGTLADRANTVSVGAAEAWTDAAGVVH
DAIDRQITNVGAGTEDTDAVNVAQLKEVAAVAETTSKYFQASGSDDSDAGAYVEGDNALA
AGEASNAIGDGASALGSGANALANNATAIGFNALATGEGAAALGSEAQATGENSVAIGNG
AAASEIGASAVGAGAQASGAYSTAGGSEAIASGQQATANGFRSTASEAGASAFGGYSEAT
GELSSALGYGAVASNAYATAVGAAATASGASAVAVGEFSEATGDESVAVGGSTFFGFIPA
RASGTGASAFGAGAWATDDYATAVGWNSWADAASATALGESATATGVNSVALGAGSSADR
DNSVSVGTATAQRQITNVAAGTEGTDAVNLDQLNAVADTAEETNRYFKASGSGNGDDVGS
YVDGTYATAAGEASNAFGTGASAYGSGSLASGRYASASGYNASATADSATAIGGSLYYED
ANGNVLLDKATSASGTGATALGAGAQATGVFSTASGAGATSAGLQSSAVGYSAEAGSDYS
TAVGAFSAASGLRTTALGYGAEASGDYASAFGWGSTASGAYAIAIGNSAQASGANSFAGG
ASAWATAAQTTAVGQLAWATSAGSTAIGQDSYAYSGINATALGKSAWASGTGSVALGAGS
RATEANVVSVGGGNGTTGPATRRITNVGAAVNATDAVNKAQLDSVAATADAVGQHFDASG
SGVANASGTDALAAGSGATASGTRSSAVGTAATASATGATALGADASARGDNSTVVGRLA
STNATNGVAVGNGAFVSNGANGIAIGSAAGASGANSVALGAGSRAVEANVVSVGGGNGTD
SPATRRIVNVAAGRVAAGSTDAVTGGQLNTTNQRVGAVETRVGDIDDRIGSVENVTANAL
TYDDSSRDRLTLSGVEGTTLDNVATGSIASGSRQAVNGGQLFQALTDTASFLGGGASVGM
QGVFVAPNYVIQGSTYNNVGDALGALDAKVSEIDQRVAGGSSNAARARSASVSTASVAAT
PEASDTAATTAETTAASTDTARVASADAPVVQGTPTAASVGAPQPVAAAVAPVTSVAMGD
GAVASGASATAIGQGASATAANSVALGQGSVADRADTVSVGAVGAERQVTNVGAGSAATD
AVNKGQLDGGIATANSYTDQRYSAMADSFDIYKGEIDERLRHQDRRIDRQGAMNAAMLNM
ATSAAGIRTQNRVGVGVGFQSGESALSLGYQRALSDRATVTVGGAFSSDDSSVGVGAGFG
W
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggatttatcgcaaggtctggaacaaagcactggggcagatggtcgttgcctcc
gaactcgccagcagccagaccccgggcgtggtcatcgatcagcgacgatcttccgccacg
cgcggtggcgccgtgctctcggccgccattgcgttgacgcttggattgggcatgaccggg
gcgatgtccgacgcgcatgcgcagtcagtggaagtgggcggcaatgccaactgcgtggtg
ctcaacagcaacgtgatcgacagctgcgtggtggatggcaatgcgaccgcatcgggcgcg
aacgccgtggccatcggcagcaacagcaccgcctcggcggccaacagcgtggcgctcggc
gccggctcgcgcgctgcacgcgccaacacggtgtcggtcggtgatgccggcaaggaacgc
caggtcaccaacgtggccgccggcactgcggccaccgatgcggtgaacaaggcgcagctc
gacaccgttgctgcaacggccgccagcgcaacgcgctacttcaaggcggacggcgaaggc
aacgacagcgatgcagcccgcatcgaaggcgaaggcgcactcgctgccggcgccagtgcc
aatgccgacggcgacggcgccaccgcgctgggccgcaacagccaggcgctggccaacgcc
accacggcggtaggcagcgatgccgttgccgccggcctgggcggcagcgcattcggccag
aacagcctggccatcggcgatgccaccgttgcggtgggtcagagcgcgatggcgttcgga
ctgggtgacgtggcgctgggcgcgtccgcgtttgccgccagcgaaaatggcgcagccacc
gccattggcgggctggccgaagccagcgccgatggcgctaccgccattggtggcggtgca
ctggcgatcggcgcgggcagcacctcgctcggccgcggcgccggcagcggcggcgaagcc
tcgattgcggtgggtgcgttcagcacggcggtggccgacttcagtgcggcgctgggttcc
aactccgcagcggttgcggtcggcagcgtcgcgctgggtgcaggctcctacgccgatcgc
gtggacaccgtgtcggtcggcaacgacaacggcctgcaacggcagatcaccaacgtcgcc
gccggcaccgaagccggtgatgcggtgaacaaggcccagctcgacgaggtgggcgaggtg
gcaggcaccaccgcgaagtacgtgcaggctaccggcagcgccgacagcgacgcaggcgcc
tttgccgacggcgacaacgccacggccgtgggcgaagccaccaatgcgctcggcaccggc
accaccgcgctcggcagcggcgccacggcggtggcgcagaacgccaccgcggtgggctac
aacgcgctggccagcggccagaacagcgccgccttcggcaccaacgcgcaggccaacggc
ccgggcagcgtggcggtgggcggcactgccgtggatgaagacggcaacccgctgatcacc
aacggcggcgtgccggtcgataccggcgccaccagcgccggcgtcggcggcaccgccgtc
ggcgccagcgcggaagcggcgggctttgccgcctcgtcgtatggcgtcggcgcctatgcg
gccggcgcacagtcgtcggcgttcggcgcggtggccaatgccaccggcgactacgccacg
gcggtgggcacgcagagcgcggccagcggcaccagcagcaccgccatcggcggtccggtc
gacctgattcccggcctgggcttcttcgtcgacacccaggccagtggcgaggccgccacc
gcggtcggcgccggtgcgattgccagcggcgactacgccgtggccaacggcacgctcagc
gaagcctcgggcacagaagccaccgccgtgggctacttcgcctacgcaccgggcgaaggc
gcgtccgcactcggtgcggaaagctgggccagtggcgaactgagcacggccgtcggcttc
tacagcaccgcgcgcggcgccaacagcgtcgccttgggcgccaattccaccgccgtgcgc
gacaacacggtgtcggtcggcgatgtcggcaacgaacgccagatcacccatgtcgccgcc
ggcaccgaagccaccgatgcggtcaacaaggcgcagctggatgccgtcgccgggactgcg
gacggcaccgcctatcgcttcaaggccaacggctcgcaggacagcgacgtgggcgcgttc
gccgatggcgacggcgcgctcgctgcaggcgaggccagcaatgccatcggcgcaggcgcc
acctcggtgggcaacggtgcgtctgcagtgggcgatgacacgttggccgtgggccgcaat
gtcgccgccaccggcaacggcagcgtcgccattggtggcgtcggccaggcctacgaccag
tacaactcgccgatcgtggatgccgatggcaacgcggtgacggtgggcaccaccgccgcg
caggatgccgttgccgtcggtgcaggtgcacaggccaccggcgcgcagagcaacgcgtac
ggcggcggcgcacaggccaccggcgacaacagcctggcgcagggctacaagtcgcgcgcc
acgggtgagtacagcgtggcgcagggcgacaacgccttcgccagcggcagcgaaagcacc
gccaccggtgcctatgcgtgggccaccagcgatggtgccaccgcgttcggttccagcgcg
tgggccaccgaggccaacgccaccgccgtcggctatgcggcctgggcggacggcagcggc
gccacctcgatcggctacaacagctgggcgcgcggcaacagcgccaccgcgctcggccgc
ggcgcgttcggttacggtgacaacagcgtcgcggtgggttaccaggcgttgggcaacagc
atcaacaccatcgccatcggcacgaatgtcgtggccggcggcgaaagcgcgatcggcatc
ggtgcgggcagcaacgccagtgccgccaacgcggtggcgctgggcgccggcgcgcgtgcc
gaccgtgcctacacggtgtcggtcggcaatgacgaccagcagcgccagatcacccaggtc
gcggccggcacggaaggtaccgatgccgtcaacgtcgaccagctcacggccgccaccgac
aagttccaggcaagcggcgatggcgtggcagtagtgggtggcgaagaaagcgtggccgcc
ggttccaacgctgcgaccgatggcgactacgccacggcagtgggttccagcagcttcgcc
agcggcaccggcgcctcggccgtcggtagcggtgcgttcgcgctcgccgatggcgccacc
gcggttggcctgaatgcacttgcgagcgcaggcaatgccaccgccgccggtgccgatgca
caggccactgccgaatacgccaccgccaacggtgccgaaagcctcgcctcgggcgagcag
agcactgccaatggcgcggccagcatcgcctcgggcgccggcagcctcgccagcggcgcg
ctgtccgaagcggccggtgaggaatcggtggcgctgggttactacagcaccgccagcggt
tcgggcgccactgcggtcggcgcggaaagcgtggtcagcggcaccttgtcggccggctac
ggcttcgcctcggaagcgactgccggctacaccaccgcgatcggtggctatgccgccgct
accgcgttcaacgccaccgcgctgggcagcttcgcccaggccaccggttccaacagcgtg
gcgctcggtggcgacgccgaagccaccggtgcctacagcaccgccaccggccagggcagc
ctggccagcggcaccaacagcgtggccatcggcggtgcgctgttcggcctgctgccgacc
gaagcttccggcaactattccaccgccgtcggcggtggtgcgtggtcgcccgggttgaac
agcaccgcgctgggcaacgcggcgacgtccgaaggcgaaaacagcgtggcgctcggtgcg
gattcgatcgccgaccgcgacgacagcgtgtcggtcggcagcgccggcagcgagcgccag
gtcaccaacgtggccgccggtaccgaaggcaccgatgcggtcaacctggaccagctcaac
gccgtggccgataccgccgccaccaccagcaagtacttccaggccagcggcagcgatgcc
agcgatgccggtgccttcgtcgacggcgatgatgcgctggcggccggtgaggccagcaat
gccatcggcaacggcgccaccgcgctgggtgcgggcagcacggtggttgccaacgaggcg
acggcagtgggcttcaatgccacggcgaccgccgattatgcggttgccatcggcagcaac
gcggccagcagcgggcagggcgcggtcgccctcggtgacctgagcactgccagtggcggc
gccgccatcgccatcggcggcggcgcgttgtcgcagggcttcggctcggtggcggtcggt
gcgggcgcggaatccagtggcctggcatccaccgcagtgggttacggcgcgtgggcgctg
ggtcgcgaaaccacggcgatcggcaacttcgccaccgccgacggctgggccgcgagtgcg
ttcggcgcgggcgccacggctgccttcttcggcaccgcgatcggtacctacagctacgcg
gacgaagtagccaccgcagtgggccagggcacgcgtgccaacgtggccggtgcggcgttc
ggcgtgcaggccaatgccggcgagtacggcgtggcgctgggcaacaacgcggccaccgcg
cagaacggcgtggcggtcggcttcaacgccctggccggcgccgatgccaacagcagcacc
cagggcatccagaccacggccgtcggcagcgaggcgtgggccaccgaagatggtgccacc
gtggtcggctacaacagctacgcgcaggcggtgaactcgaccgtggtgggcagcaacacc
tggaccaccaaggacgccgacaacagtgtcgctctcggcgccggcacgctggccgaccgt
gccaacacggtctcggtcggtgcggccgaggcctggaccgatgcggccggcgtggtccat
gacgcgattgaccgccagatcaccaacgtgggtgccggtaccgaagacaccgatgcggtg
aacgtggcccagctgaaggaagtggctgcggtggctgaaaccaccagcaagtacttccag
gccagcggcagcgacgacagcgatgccggtgcctatgtggaaggcgacaacgcactggcg
gcgggtgaagcgtccaatgcgatcggcgatggcgccagcgcactcggcagtggtgccaac
gcgctggccaacaatgccaccgccatcggcttcaacgcgctcgccaccggcgaaggtgcg
gccgcgctgggcagcgaggcccaggcgaccggcgaaaacagcgtggccatcggcaacggt
gccgccgccagcgagatcggtgccagcgcggtgggtgccggtgcgcaggcctccggtgcg
tacagcacggccggcggcagcgaagccatcgcgtcgggccagcaggccacggcgaacggc
ttccgctccacggcgtcggaagccggtgcatcggcgttcggcgggtacagcgaagccacc
ggcgagctgtcctcggcactgggttatggcgcagtcgcctccaatgcctatgcaaccgcg
gtgggtgcagccgccacggcgtccggtgccagcgcggtcgcggtgggtgagttcagtgaa
gccaccggcgacgaaagcgtcgcggtcggtggcagtacgttcttcggcttcattccggcg
cgcgcgtcaggcacgggtgcatcggccttcggcgccggtgcctgggccaccgatgactac
gccaccgcggtcggctggaattcgtgggccgatgccgccagcgccaccgcgctgggcgaa
agcgccaccgccaccggcgtgaacagcgtggccttgggcgcaggctccagtgcggaccgc
gacaacagcgtttcggttggcaccgccactgcgcagcggcagatcaccaacgtggccgcc
ggtaccgaaggcaccgacgcggtcaacctcgaccagctcaacgccgtggccgataccgcc
gaggaaaccaaccgctacttcaaggcttccggcagcggcaatggcgatgacgtgggcagc
tatgtcgatggcacctatgccacggcggcaggcgaagcgtccaacgcgttcggcaccggc
gcgtcggcctacggcagcggttcgctggcctcaggccggtacgcttcggcgtcgggctac
aacgcctcggccaccgccgattcggccaccgcgatcggtggttcgttgtactacgaagat
gccaacggcaacgtgctgctcgacaaggccaccagtgccagcggcaccggcgccaccgca
ctgggtgccggcgcacaggctaccggggtgttcagcaccgccagcggtgccggcgccacc
tcggccgggctgcagtcgtccgccgtcggctacagcgccgaagcgggcagcgactacagc
acggcggtgggtgcgttcagtgccgccagcgggttgcgcaccaccgcgctcggctacggt
gccgaagccagcggcgactacgcctccgccttcggctggggcagcaccgcctccggcgcg
tacgccatcgccatcggcaacagcgcgcaggccagcggcgccaacagcttcgccggcggc
gccagcgcctgggccaccgctgcacagaccactgccgtcggccagttggcctgggcgacc
tcggccggctccacggcgatcggccaggacagctacgcctacagcggcatcaacgccacc
gcactgggcaagagcgcctgggccagcggcaccggcagcgttgcactgggcgcaggctcg
cgtgccaccgaagccaacgtggtctcggtcggtggcggcaacggcaccactggtccggcc
acgcgccgcatcaccaatgtcggtgcggcagtgaatgccaccgatgcggtcaacaaggcg
caactggacagcgtcgcggcgaccgccgatgccgtgggccagcacttcgacgccagcggc
agcggcgtggccaacgccagcggcaccgatgcgctggccgccggttcgggcgccaccgcc
agcggcacccgcagcagcgcggtgggtaccgcggcaaccgcgtcggccaccggcgccacg
gcgctcggtgcggatgcctcggcacgcggtgacaacagcaccgtggtcggccgcctggcc
tcgaccaacgccaccaacggcgtggccgtgggcaacggtgccttcgtcagcaacggcgcc
aacggcatcgccatcggctccgctgccggtgcgtccggtgccaactcggtggcgctgggt
gcagggtcgcgtgcggtggaggccaacgtggtctcggtcggtggcggcaacggtaccgat
tcgccggccacccgccgcatcgtcaacgtcgcggccggtcgtgtcgccgcaggcagcacc
gatgcggtcactggcggccagctcaacaccaccaaccagcgcgtgggcgcagtggaaacc
cgggtcggcgacatcgatgaccgcatcggctcggtggagaacgtgaccgccaacgcgctg
acctacgacgacagcagccgcgacaggctcaccctgtcgggcgtggagggcaccaccctg
gacaacgtcgccaccggttcgatcgccagcggcagccgccaggccgtcaacggcggacag
ctgttccaggccctgaccgacaccgccagcttcctcggcggcggcgccagcgtcggcatg
cagggcgtgttcgtcgcgcccaactacgtgatccagggcagcacctacaacaacgtgggt
gacgcgctcggggcgctggatgccaaggtcagcgaaatcgaccagcgcgtggccggtggc
agcagcaacgcggcacgtgcgcgctccgcgtcggtgtccaccgccagcgtggcggccacg
cccgaggcttccgatacggcggcgaccacggccgaaaccaccgccgccagcaccgacacc
gcccgcgtggccagtgccgatgccccggtcgtgcagggcacgccgaccgcggccagtgtc
ggtgcgccgcagccggtcgcggccgccgtcgcgccggtcacctcggtggcgatgggcgac
ggtgccgtggccagcggcgcctcggcgaccgcgatcgggcagggggccagcgccacggcc
gccaactcggtcgcgctgggccagggctcggtcgccgaccgcgccgacacggtctcggtg
ggtgccgtcggtgccgaacgccaggtcaccaacgtgggcgccggcagcgcagccaccgat
gcggtcaacaagggccagctggacggtggcatcgccaccgccaacagctacaccgaccag
cgctacagcgcgatggccgacagcttcgacatctacaagggcgaaatcgatgagcgcctg
cgccaccaggaccgccgcatcgaccgccagggcgcgatgaacgccgcgatgctgaacatg
gccaccagtgccgccggcatccgcacgcagaaccgcgtcggtgtcggtgtcggcttccag
agcggcgagtcggcgctgtcgctgggctaccagcgtgccctcagcgaccgcgccacggtc
actgtcggcggcgcattcagcagtgatgacagctcggtgggcgtgggtgccggcttcggc
tggtaa
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