Stenotrophomonas rhizophila: BAY15_1390
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Entry
BAY15_1390 CDS
T04500
Name
(GenBank) hypothetical protein
KO
K27078
spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAY15_1390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
srh02044
]
BAY15_1390
02035 Bacterial motility proteins [BR:
srh02035
]
BAY15_1390
Secretion system [BR:
srh02044
]
Chaperone-usher system
Type 1 pilus assembly protein
BAY15_1390
Bacterial motility proteins [BR:
srh02035
]
Pilus system
Fimbrial proteins
BAY15_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCPU
Motif
Other DBs
NCBI-ProteinID:
AOA71824
LinkDB
All DBs
Position
complement(1581815..1582855)
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AA seq
346 aa
AA seq
DB search
MSLRLLLGGLLALAGLVGAGVARADTTCTTTTPVTAAFGNVGNAAAAPSFTTTTFTITCN
TAALSLLATASVRACIGIGVGSTGVAISPLRRMTNTTADPLSFQLFTSAAYSTIWGLTPG
TSPGPQVVDLNYSVPLLTGGSGAVTVTIYGRIPASQTLAAGSYSTAFSGADVRLEYAYNE
VLLGTATAPAACTTATGVSGHKTATGGFPFTVTATVLPQCSAYVTTDMDFGTSAGTITAN
IDRTSTIGLTCLNRTAYTIALDNGLYANGSVRRMRHTTNPAFFIPYALYRESTRTQRWGS
TANVDLVSGTGTGSAQTLTVYGRAPPTVGAVAAGSYSDQIKVTITY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcctgctgctgggggggttgctggcactggccgggctagtgggcgccggc
gtggcccgcgccgacaccacctgcaccaccaccaccccggtcacggccgccttcggcaac
gtcggaaacgccgccgctgcgcccagcttcaccaccaccacgttcaccatcacctgcaac
accgccgcgctgagcctgctggcaacggcgtcggtacgcgcctgcatcggcatcggcgtg
ggcagcaccggcgtggccatttcaccgctgcggcggatgaccaacaccaccgcggatccg
ctcagcttccagctgttcaccagcgccgcctacagcaccatatggggtctgacccccggc
acctcgcccgggccgcaggtggtggacctgaactactcggtgcccctgctcaccggcggc
agcggcgcggtcaccgtgaccatctacggtcgcatcccagccagccagacgctggcggcc
ggcagttacagcaccgcgttcagcggtgccgacgtccgcctggaatatgcctacaacgag
gtcctgctgggcacggccaccgcgccggcggcgtgcaccacggccaccggcgtcagcggg
cacaagaccgccaccggcggcttcccgttcacggtcaccgccaccgtgctgccgcagtgc
agtgcctatgtcactaccgacatggacttcggcaccagtgccggcacgatcaccgccaac
atcgaccgcacgtcgaccatcggcctgacctgcctcaaccgcaccgcctacaccatcgcg
ctggacaacggcctgtacgcgaacggcagcgtgcggcgcatgcggcacaccaccaacccg
gcctttttcattccctatgcgctgtaccgcgaaagcacccgcacccagcgctggggcagc
accgccaacgtggacctggtctcgggcacggggaccggcagcgcccagaccctgaccgta
tatgggcgtgcaccgcccacggtcggcgcagtggccgccggcagctacagcgaccagatc
aaggtgacgatcacctactga
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