Stenotrophomonas rhizophila: BAY15_1399
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Entry
BAY15_1399 CDS
T04500
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh00300
Lysine biosynthesis
srh01100
Metabolic pathways
srh01120
Microbial metabolism in diverse environments
srh01230
Biosynthesis of amino acids
Module
srh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAY15_1399
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srh01002
]
BAY15_1399
Enzymes [BR:
srh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BAY15_1399
Peptidases and inhibitors [BR:
srh01002
]
Metallo peptidases
Family M20
BAY15_1399
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AOA71833
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Position
1593498..1594643
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AA seq
381 aa
AA seq
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MNDVVALTCDLIARPSVTPEDAGCQALLAGRLQQAGFTCEHLRLGEVDNLWATHGQGAPV
LVLLGHTDVVPSGPVEAWTSEPFDPQIRDGVLYGRGAADMKGSVAAFVVAAEQFVAAHPD
HSGTLAVLLTSDEEGDAIDGVRRVADLFRERGQKIDWCITGEPSSTAVLGDLLRVGRRGS
LSGTLTVQGVQGHVAYPHKARNPIHLAAAALSELTARHWDDGFESFPPTSLQVSNIHAGT
GANNVIPGELQVLFNLRYNPLWNAPKLEQEITALLDRHGLEYRLKWHRSGEPFYTPEGTL
RRVAREVLGEFAGAAPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDENVSVADLE
KLPELYRCLIERLLAEGRANC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgttgttgcactgacctgcgacctgatcgcccggccgtcggtgacgcccgag
gatgccggctgccaggcactgctggccggtcgcctgcagcaggccggcttcacctgcgaa
cacctgcgcctgggcgaggtcgacaacctgtgggccacgcacgggcagggcgcaccggtg
ctggtgctgctgggccataccgacgtggtgccgagtggaccggtcgaggcgtggaccagt
gaaccgttcgatccgcagatccgcgacggcgtgctgtatgggcgcggcgcggccgacatg
aaaggcagcgtggccgcgttcgtggtggccgcggagcagttcgtggccgcccatccggac
cactccggcacgctggcagtgctgctgaccagcgatgaagaaggcgatgccatcgacggc
gtgcgccgggtcgcagacctgttccgcgagcgcggccagaagatcgactggtgcatcacc
ggcgagccgtcctccaccgccgtgctcggcgacctgctgcgggttggccggcgcggcagc
ctgtcgggcacgctgaccgttcagggcgtgcagggtcacgtggcgtacccgcacaaggcg
cgcaatccgatccacctcgccgctgcggcgctgtccgagttgaccgcgcggcactgggac
gatggcttcgaaagcttcccaccgaccagcctgcaggtgtccaacatccacgccggcacc
ggcgccaacaacgtgattcccggcgagctgcaggtgctgttcaacctgcgctacaacccg
ctctggaacgcgccgaaactggagcaggagatcaccgcgctgctggaccgccatggcctg
gagtaccggctgaaatggcaccgcagcggggaaccgttctacacccccgaaggtaccctg
cgccgggtggcacgcgaggtgctgggcgaattcgccggcgccgcgccggaggagagcacc
ggcggcggcacctcggacgcgcgcttcatcgcaccgctgggcgcacagtgcatcgaagtg
gggccggtcaacgccagcatccaccaggtggatgagaacgtgtcggtggccgacctggag
aagctgccggaactgtaccggtgcctgatcgagcgccttctcgccgaaggtagagccaac
tgttag
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