Stenotrophomonas rhizophila: BAY15_1579
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Entry
BAY15_1579 CDS
T04500
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAY15_1579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srh03019
]
BAY15_1579
Enzymes [BR:
srh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BAY15_1579
Messenger RNA biogenesis [BR:
srh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BAY15_1579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AOA72013
UniProt:
A0AAP5AK89
LinkDB
All DBs
Position
1783627..1785003
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AA seq
458 aa
AA seq
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MPLGNPETSTGSANINSSATSPFSLRVIPRDQHNISRKDISPNALRVLYRLRDSGFGAYL
VGGAVRDLLVGGNPKDFDVATDATPEQVKSLFRNCRLIGRRFRLAHVVFGREIIEVATFR
ANIDDGSGDREMENGMLVRDNVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFEDVQ
ARLMKLIGDPEKRYQEDPVRMLRAVRLAAKLGFQIDDASAEPLPRLASLLGEAAPARLFE
EVLKLFLSGHGVASFEGLERYGLLDVLFPESAAALRSNRSGALRRMVIEGLHNTDQRVAN
DEPVSPSFLFALLLWPAFCRALATLQKQGVQLEEAQRRAADRVTLHQLTTIALPRRFSLP
MQEIWLLQGRFSSRQRKRVVRTLTHPRFRAAFDFLALRQVASSEHQADVEFWREAQLQSG
PELDSTLDAAQAEGELDENGAPRKRRRRRRRPGGAAGE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccattgggcaatcccgaaacttcaaccggaagcgccaacatcaattcctccgctaca
tcaccgttcagtctgcgcgtgatcccccgcgaccagcacaacatctcccgcaaggacatc
agccccaacgcgttgcgcgtcctgtaccggctgcgcgactcgggctttggcgcctacctg
gtgggtggcgccgtgcgcgacctgctggtcggcggcaaccccaaggatttcgacgtggcc
accgatgccacgccggagcaggtcaagtcgctgttccgcaactgccgcctgatcgggcgc
cgcttccgcctggcgcacgtggtgttcggccgtgaaatcatcgaagtggccaccttccgc
gccaacatcgacgatggcagcggtgaccgcgagatggaaaacggcatgctggtgcgcgac
aacgtgtacggcagcatcgaagacgatgcggtgcgccgcgacttcacctgcaatgccctg
tactacgccatcgaggatttctcggtgcgcgattacaccggcggcttcgaagacgtgcag
gcgcgcctgatgaaactcatcggcgatcccgaaaagcgctaccaggaagatcccgtgcgc
atgctgcgcgcggtgcgcctggccgccaagctgggcttccagatcgacgacgccagcgcc
gaaccgctgccgcgcctggccagcctgctgggcgaagccgcgccggcccgcctgttcgaa
gaagtgctcaagctgttcctgtccggccacggcgtggccagcttcgaggggctggagcgt
tacggcctgctcgacgtgctgttcccggaaagtgccgccgcgctgcgcagcaaccgcagt
ggcgcgctgcgccgcatggtcatcgaaggcctgcacaacaccgaccagcgcgtggccaac
gacgagccggtctcgccctcgttcctgttcgcgctgctgctgtggccggcgttctgccgc
gcgctggcgaccctgcagaagcagggcgtgcagttggaagaagcgcagcgccgtgccgcc
gaccgggtcaccctgcaccagctgaccaccatcgcgctgccgcgccggttctcgctgccg
atgcaggaaatctggttgctgcagggccgtttcagctcgcgccagcgcaagcgcgtggtg
cgcaccctgacccacccgcgcttccgtgccgcgttcgatttcctggcactgcgccaggtg
gcctccagcgagcaccaggccgatgtggagttctggcgcgaagcccagctgcagtccggg
cccgagctggattccacgctggacgccgcgcaggccgaaggcgagctggacgaaaacggg
gcaccgcgcaagcgccgccgccgtcgtcgtcgtcccggtggcgccgcaggcgagtaa
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