Stenotrophomonas rhizophila: BAY15_1608
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Entry
BAY15_1608 CDS
T04500
Name
(GenBank) DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAY15_1608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_1608
Enzymes [BR:
srh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BAY15_1608
DNA repair and recombination proteins [BR:
srh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAY15_1608
Prokaryotic type
BAY15_1608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
NUDIX
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOA72042
LinkDB
All DBs
Position
complement(1810438..1811535)
Genome browser
AA seq
365 aa
AA seq
DB search
MSPAIADAFVDRLLPWFDGHGRHDLPWQHPRTPYRVWLSEIMLQQTQVATVIPYFLKFLA
VFPTLPDLAAASNDAVMAQWAGLGYYARARNLHAAAQRCVELHGGELPRDVDALHALPGI
GRSTAGAILSQAWNDRFAILDGNVKRVLTRYHGIEGFPGLPAVEKVLWALAELHVEHVPG
GRLADYTQAQMDLGATVCTRSRPACVICPLQDDCVARREGRSDQLPTPKPSKVLPEREAV
ALLLRDAQGRVLLQKRPDTGIWAQLWTLPQADSGTALQDWFDAHVLGSLEDAEELPVLQH
TFSHYRLHLQILSRQVDGLRNDIAGLRWVPARELPSLGLPAPIRKLLENGSSRKLRAATT
LKRID
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgccatcgccgacgcgttcgtcgatcggctgctgccgtggttcgacggccat
ggccggcatgacttgccctggcagcatccgcgtacgccgtaccgggtgtggttgtcggaa
atcatgctccagcagacccaggtcgccacggtcatcccgtacttcctgaagtttcttgcc
gtgttccccaccctgcccgacctcgccgccgccagcaatgacgcggtgatggcgcagtgg
gccggcttgggctactacgcccgcgcgcgcaacctgcatgccgccgcgcagcgctgtgtc
gaactgcacggcggcgagctgccgcgcgacgtcgatgcactgcatgcactgccgggcatc
ggccgcagcaccgccggtgcgatcctcagccaggcctggaacgaccgcttcgcgatcctc
gatggcaacgtcaagcgtgtgctcacccgctaccacggcatcgaaggattccccggcctg
cccgcggtggaaaaggtgttgtgggcgctggcagagctgcacgtggagcatgttcccggc
ggccgtctggccgattacacgcaggcgcagatggacctgggcgccacggtctgcacccgc
agccggccagcctgcgtgatctgcccgctgcaggacgactgcgtggcgcgccgcgaaggc
cgcagcgaccagctgcccaccccgaagcccagcaaggtcctgcccgaacgcgaggcggtg
gcgctgctgctgcgcgatgcacagggccgcgtgctgctgcagaagcggccggacaccggc
atctgggcgcagctgtggacgctgccgcaggccgacagcggcaccgcgctgcaggactgg
ttcgatgcgcacgtgctgggctcgctggaagatgccgaagagctgccggtgctgcagcac
accttcagccactatcgcctgcacctgcagatcctgtcgcggcaggtggatggcctgcgc
aatgacattgctggcctgcgctgggtcccggcgcgggagctgcccagcctgggtctgccc
gcgccgatccgcaaactgctggaaaacggaagtagccgtaaactacgcgctgcaacgact
ttgaagaggatcgactag
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