Stenotrophomonas rhizophila: BAY15_2258
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Entry
BAY15_2258 CDS
T04500
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BAY15_2258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srh03019
]
BAY15_2258
03009 Ribosome biogenesis [BR:
srh03009
]
BAY15_2258
Messenger RNA biogenesis [BR:
srh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAY15_2258
Ribosome biogenesis [BR:
srh03009
]
Eukaryotic type
Pre-60S particles
RNases
BAY15_2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Annexin
Motif
Other DBs
NCBI-ProteinID:
AOA72692
LinkDB
All DBs
Position
complement(2584254..2584823)
Genome browser
AA seq
189 aa
AA seq
DB search
MADNGAEGERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPVERLEA
MDEWNRNQHRRSGLWQRVVDSQVTLAQAEAQTVNFLAQWIKAGASPMCGNSICQDRRFLH
REMPRLEKYFHYRNLDVSTVKELARRWAPTVAAGVGKTSSHTALSDVHDSIAELRHYRQF
MGALSGLPA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcgccgaaggcgaacgactgatctggatcgacctggaaatgaccggt
ctggataccgacaacgattcgatcatcgagatcgccaccgtcgtcaccgatgcgcagttg
aacgtgctggccgagggcccggagttcgccatccaccacccggtggagcgcctggaagcc
atggacgaatggaaccgcaaccagcaccgccgttccgggctgtggcagcgcgtggtcgac
agccaggtgaccctggcgcaggccgaagcgcagacggtgaatttcctggcgcagtggatc
aaggccggcgcctcgccgatgtgcggcaactcgatctgccaggaccgccgtttcctgcac
cgtgaaatgccgcgcctggagaagtacttccactaccgcaacctggacgtgtccacggtg
aaggagctggcccggcgctgggcaccgacggtggccgccggcgtgggcaagacctccagc
cataccgcgctgagcgacgtgcatgattcgatcgccgaactgcgccattaccggcagttc
atgggggcgctgtccggcctgccggcctga
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