Stenotrophomonas rhizophila: BAY15_2504
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Entry
BAY15_2504 CDS
T04500
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srh03016
]
BAY15_2504
Enzymes [BR:
srh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BAY15_2504
Transfer RNA biogenesis [BR:
srh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BAY15_2504
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOA72938
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All DBs
Position
2867342..2868424
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AA seq
360 aa
AA seq
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MAYWIKTPAELDERYRQRPTRIGLDTEFIRERTYWPQLALVQMAVGDEILIIDPLIPGMT
EALAPWLADTSILKVMHSASEDLVTFKVACGVLPRPLFDTQIGASLAGIGGGMGYQKLVT
AITGVTLAKGETRSDWMRRPLTDSQLEYAADDVEYLFAIHDAVDAKLGELDRRQWLQDDA
ERLLASVEQDEERWPHVAMRSAQFMDAPAQRRLLRLLRWRDVQARASDKPRSWILDNELA
ALLARTPPADAGALGKLMEGFPKAPRKLAAQVWEALEAPLHDEAEAPLALPANDANKQAL
KRLQDAVSARTAELGLPDGVLASRKHLESYLESRTWPQALAGWRQAVLEPVLAPLLPAAG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtggcctattggatcaaaaccccggcggaactggacgagcgctaccgccagcgccccacc
cgcatcgggctggacaccgaattcatccgtgaacgcacctactggccgcagctggcgctg
gtgcagatggcggtcggcgatgaaatcctgatcatcgacccgttgattccgggcatgacc
gaggcgctggcgccgtggctggccgatacgtcgatcctgaaggtgatgcacagcgccagc
gaagacctggtcaccttcaaggtggcctgcggcgtgctgccgcggccgttgttcgacacc
cagatcggcgcgtcgctggccggtatcggcggtgggatgggctaccagaagctggtcacc
gccatcaccggggtgaccctggccaagggcgagacccgctcggactggatgcgccgcccg
ctgacggattcgcagctggagtacgccgccgacgacgtggagtacctgttcgcgatccac
gatgcggtggatgcgaagctgggcgagctggaccgccgccagtggctgcaggacgatgcc
gagcgcctgctggccagtgtcgagcaggacgaagagcgctggccgcacgtggcgatgcgc
tcggcgcagttcatggatgcgcccgcacagcgccgtctgttgcgcctgctgcgctggcgt
gacgtgcaggcacgggcaagcgacaagccgcgcagctggatcctggacaacgaactggcc
gcgctgctggcacgcacgccgccggccgatgccggcgcactgggcaagctgatggaaggc
ttccccaaagccccgcgcaagctggccgcgcaggtctgggaagcgctggaagcgccgctg
cacgatgaggccgaggcgccgctggcgctgccggccaacgatgccaacaagcaggcgttg
aagcggctgcaggacgcggtgagcgcacgtaccgccgagctgggcctgcccgatggcgtg
ctggcttcgcgcaagcacctggaaagttatctggaaagccgcacgtggccgcaggccctg
gcgggatggcggcaggcggtgctggagccggtgctggcgcccttgttgcccgccgcaggc
tga
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