Stenotrophomonas rhizophila: BAY15_2597
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Entry
BAY15_2597 CDS
T04500
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srh03016
]
BAY15_2597
Enzymes [BR:
srh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BAY15_2597
Transfer RNA biogenesis [BR:
srh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BAY15_2597
Prokaryotic type
BAY15_2597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOA73031
LinkDB
All DBs
Position
complement(2967710..2968483)
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AA seq
257 aa
AA seq
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MRYALGVEYDGSEFKGWQQLGESGCPSVQASLQDALSSVAAAPIQVVCAGRTDAGVHGEC
QVVHFETDVARDPRGWTLGTTTRLPRSIAVRWCVPVADDFHARFSARARRYRYRLLNRQI
RPALHRQTLSWERRPLDAALMHQAGQALLGENDFSAFRSAQCEALHARRELQAISVTRQG
EIVEVCVQANAFLHHMVRNIVGSLILIGCGEKPVSWMAELLAGQDRTVAGPTAPPQGLVF
VGPLYPDNWHLPAEVTL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcattgggcgtggaatacgacggcagcgagttcaagggctggcagcagctc
ggtgagagcggctgccccagcgtgcaggccagcctgcaggacgccctttcatcggtggcc
gctgcgccgatccaggtggtctgtgccgggcgcaccgatgccggcgtgcacggcgaatgc
caagtggtgcacttcgagaccgatgtggcgcgtgatccgcgcggctggaccctgggcacc
accacccggctgccacgctcgatcgcggtgcgctggtgcgtaccggtggccgatgacttc
cacgcgcgcttctccgcccgcgcccggcgttaccgctaccggctgctcaaccggcagatc
cgcccggcactgcaccggcagaccctgagctgggagcgccggccgctcgatgccgcgctg
atgcaccaggccgggcaggccctgctcggcgagaacgacttcagcgccttccgcagcgcc
cagtgcgaggcgctgcacgcccgccgcgagctgcaggcgatcagcgtgacccgccagggc
gagatcgtggaggtctgcgttcaggccaatgcattccttcatcacatggtgcgcaatatc
gtcggctcattgatcctgattggctgtggggaaaagccggtgtcgtggatggccgagctg
ctggccggccaggaccgcaccgtggccggcccgaccgcaccgccgcagggccttgtattc
gttggcccgttgtaccccgacaactggcacctgcccgccgaggtcaccctatga
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