Stenotrophomonas rhizophila: BAY15_2607
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Entry
BAY15_2607 CDS
T04500
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
srh
Stenotrophomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_2607
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BAY15_2607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
CbiA
AAA_30
T2SSE
TrwB_AAD_bind
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOA73041
LinkDB
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Position
2978511..2980016
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AA seq
501 aa
AA seq
DB search
MDPILLGKGITDDVPVTLQPKLGNRHGLVAGATGTGKTVTLMTLAEGFSRIGVPVFLADV
KGDVSGLAVPGAGTEALLQRAKEIGVADYAPAGSPTIFWDLYGKLGHPVRTTVSEMGPTL
LARILELNDTQSGVLDIVFKLADDRGLLLLDLDDLRALLGLVADERKDISTEYGLVSAQT
VAAIQRSLLRLSQDGGESFFGEPALELADLMRVNHDGRGVIGILAADQLVLKPRLYSTFL
LWLLSELFETLPEVGDLDKPKLVFIFDEAHLLFDDAPAALVQRIEQVVRLIRSKGVGVYL
CSQFPDDVPANILGQLGNRVQHALRAFTPRDQKAVKIAAETFVPNPKLDVVAALSQLGTG
EALVSTLQDKGIPSPVQQTRIAPPRCRMGAITEAERAQVRAGSPVGSRYDTAVNRESAAE
LLAQRAAKVVEQPDAPKARTREQDEQQEGGFGQSIKDAIFGTKRRQGMIETMAKQTTRTM
GTKLGNQIVRGILGGIFGGKR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatcctcctcggcaaaggcattaccgacgatgtccccgtcaccctgcaaccg
aaactgggcaaccgccatggcctggtggccggggcgacgggcacgggcaagaccgtgacc
ctgatgaccctggccgaaggcttttcgcgcatcggcgtcccggtgttcctggcggacgtc
aagggcgatgtctccggcctggccgtgcccggcgcaggcaccgaggcgctgctgcagcgc
gcgaaggagatcggcgtggccgattacgcgccggccggcagccccacgatcttctgggac
ctgtacggcaagctgggccacccggtgcgcactacggtgagcgaaatgggcccgaccctg
ctggcgcgcatcctggagctcaacgacacccagtcgggggtgctggacatcgtgttcaag
ctggccgacgaccgtggcctgctgctgctcgacctggacgacctgcgtgccctgctcggc
ctggtggccgacgagcgcaaggacatctccaccgaatatggcctggtcagcgcgcagacg
gtggcggcgatccagcgttcgctgctgcggctgtcgcaggacggcggtgaatccttcttt
ggcgagccggcgctggagctggcggacctgatgcgggtcaatcacgacggccgcggcgtg
atcggcatcctggccgccgaccagctggtgctcaagccgcgcctgtactcgaccttcctg
ctgtggctgctgtcggagctgttcgagacgctgccggaggtgggcgacctggacaagccc
aagctggtcttcatcttcgacgaggcgcacctgctgttcgacgacgcgccggccgcgctg
gtgcagcgcatcgagcaggtggtgcggctgatccgctccaagggcgtgggcgtgtacttg
tgctcgcagttccccgacgacgtgccagccaacatcctgggccagctgggcaaccgcgtg
cagcacgcgctgcgggcgttcaccccgcgcgaccagaaggcggtgaagatcgccgccgaa
accttcgtgccgaacccgaagctggacgtggtggcggccctttcccagctgggtaccggc
gaggcgctggtgtccacgctgcaggacaaaggcatcccctcccccgtgcagcagacccgg
atcgccccgccgcgctgccggatgggcgcgatcaccgaggccgagcgtgcgcaggtacgc
gccggcagcccggtcggcagccgctacgacaccgcagtgaaccgcgaatcggcagcggag
ctgctggcccagcgcgcggccaaggtggtggaacagcccgacgcgcccaaggcgcgtacc
cgtgagcaggatgagcagcaggaaggcggcttcggccagtcgatcaaggatgcgatcttc
ggcaccaagcgccgccagggcatgatcgaaacgatggccaagcagactacccgcaccatg
ggcaccaagctgggcaaccagatcgtgcgcggcatcctgggcggcattttcgggggcaag
cgctga
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