Stenotrophomonas rhizophila: BAY15_3007
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Entry
BAY15_3007 CDS
T04500
Name
(GenBank) type II citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh00020
Citrate cycle (TCA cycle)
srh00630
Glyoxylate and dicarboxylate metabolism
srh01100
Metabolic pathways
srh01110
Biosynthesis of secondary metabolites
srh01120
Microbial metabolism in diverse environments
srh01200
Carbon metabolism
srh01210
2-Oxocarboxylic acid metabolism
srh01230
Biosynthesis of amino acids
Module
srh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srh_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
srh_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BAY15_3007
00630 Glyoxylate and dicarboxylate metabolism
BAY15_3007
Enzymes [BR:
srh01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
BAY15_3007
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
UBR1-like_wing
Motif
Other DBs
NCBI-ProteinID:
AOA73439
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Position
complement(3452139..3453416)
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AA seq
425 aa
AA seq
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MSDLDQVTLNAGDKSVVLPVIKPTLGNDCVDISKLTKETGLFTYDSGFTATASCKSAITY
IDGDKGVLLYRGYPIEQLSEKSSYVEVAYLLINGERPSAEQLKAFTDELAAEANVDASIN
ALIASFDKDAHPMAILTAAIAQLSAKYHASLDLSDAEQRRQSAVRLIAKVPTLSALIYRH
GKGLPANTPDTSLDYVSRFLKQTFESADGQYELNPDVVKALDLLFILHADHEQNASTSTV
RLVGSTGANPYASVAAGVTALWGPAHGGANEAVLKMLEEIGSADNVESAVLKAKDKTSGF
RLMGFGHRVYKNFDPRAKVIGEMTGKVLKQLGVQDPLLDVAVKLEQAALQDDYFVARKLY
PNVDFYSGIIYKALQIPTEMFTVMFALGRTSGWVAHWLEQQVDPEMKIGRPRQVYTGSDV
RDYQG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatcttgatcaggtcacgctgaatgccggcgacaagtcggttgttctgcctgtc
atcaaacccacgctcggcaacgattgcgtcgatatttcgaagctgaccaaggaaaccggt
ctcttcacctacgactccggcttcaccgccaccgccagctgcaagtccgccatcacctac
atcgacggtgacaagggcgtgctgctgtatcgcggctaccccatcgagcagctgtcggaa
aagtccagctacgtcgaagtggcttacctgctgatcaacggcgagcgtccgagcgccgag
cagctgaaggccttcaccgatgagctggctgccgaagccaacgtcgatgcctcgatcaat
gccctgatcgccagcttcgacaaggatgcccacccgatggccatcctgaccgctgccatc
gcgcagctgtcggcgaagtaccacgcctcgctggacctgtccgacgccgagcagcgccgc
cagtccgccgtccgcctgatcgccaaggtgccaaccctgtcggcgctgatctaccgccac
ggcaagggcctgccggccaacacgccggacacctcgctggattacgtcagccgcttcctg
aagcagaccttcgagtcggccgatggccagtacgagctgaacccggacgtggtcaaggcg
ctggacctgctcttcatcctgcatgccgaccacgagcagaacgcctccacctcgacggtg
cgcctggtcggttcgaccggtgccaacccgtatgcgtcggtcgccgctggcgtcaccgcg
ctgtggggtccggcccacggcggtgccaacgaagccgtgttgaagatgctggaagaaatc
ggttcggcggacaacgttgaatcggccgtgctcaaggccaaggacaagacctcgggcttc
cgcctgatgggcttcggccaccgcgtgtacaagaacttcgacccgcgcgcgaaggtcatc
ggcgagatgaccggcaaggtgctcaagcagctgggcgtgcaggatccgctgctggacgtt
gccgtgaagctggaacaggccgcgctgcaggacgactacttcgtcgcccgcaagctgtac
ccgaacgtcgatttctacagcggcatcatctacaaggcgctgcagatcccgaccgaaatg
ttcaccgtcatgttcgccctgggccgcacctccggctgggtcgcgcactggctcgaacag
caggttgacccggaaatgaagatcggccgcccgcgccaggtctacaccggtagcgacgtg
cgtgactaccagggctga
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