Stenotrophomonas rhizophila: BAY15_3013
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Entry
BAY15_3013 CDS
T04500
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAY15_3013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srh03021
]
BAY15_3013
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_3013
Enzymes [BR:
srh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAY15_3013
Transcription machinery [BR:
srh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAY15_3013
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAY15_3013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AOA73445
UniProt:
A0AAP5E8B5
LinkDB
All DBs
Position
complement(3460129..3460428)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVDNRFELVMMASKRARQLANGVQATLDNSETEDKPTVLALREIAARKI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcaccgtagaagattgcctggaagtcgtcgataaccgtttcgagctggtc
atgatggcgtccaagcgcgcccgtcagctggccaacggtgtccaggccaccctggacaac
agcgaaaccgaagacaagccgaccgtgctggcgctgcgcgaaattgccgcccgcaagatc
gacaacgccctgatcgacgaagtcgagaaggccgagcgcgagcgtgccgagcgtgaagca
ctggaatgggccgctgccgaagtcgtcgccgacgaagacatgtccaagaacgacgactga
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