Stenotrophomonas rhizophila: BAY15_3172
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Entry
BAY15_3172 CDS
T04500
Name
(GenBank) autotransporter
Organism
srh
Stenotrophomonas rhizophila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AOA73604
LinkDB
All DBs
Position
complement(3637067..3640048)
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AA seq
993 aa
AA seq
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MRPMNATPPRSRLAAGIARSLRVACGGLLLATTTAPAWAGCDSTSPTTGQTVTCTAAAPS
PQTTPIASVPGSSNVTVNVQAGAQLGIASGAAIALDGGSGHRIDNSGSITSASGVGILTN
AATTVVNRGVISGSTAGIIFGAGADRLDMLGGSISSSVLQGAGNDAITLSGGTVGSIDQG
ADADSLEVSGGTVSGTVQQGSGIDTFLMTGGSIGALLQGDGLDRFRMTDGRIVGAFDDGD
YGEMTGGRIGRVNMKLEDNTFLMSGGTIDGNLVTGFGNDTIVLSDGYIGGNISVSGGNDS
VTITGGTVRGEIRLSFGDDRFDWRGGGVVHGLVDFGEGNDTATLADLNVSYLGALPGFDG
GLGTDTLNMDNVKTDGVARFTGWESMTLANDSQLTFDGDLRLGDTGSGTGALDVDATSTL
FGGGVNASIVAFNAALPVNVTNAGRIDLTNGGGGAGDAFTIAGNYTGNGGALYLDTVLGA
DAAASDRLVISNGVASGTTGVGILNAGGAGAETVADGILVVQAINGASTSPGAFALYAPV
AAGAYEYFLFKGGVSAGSSENWYLRSTVVNGVVAAPAPPPIGLGSVTPEPPPPEALGTPP
PALPPPPSPDVPENPDPVAAEPAPPPEPAPPPPAAPPQDDVPPPVPTEVAAVPGPLAEPP
TPDARPSEEAIVPLYRLETGLYSVVPPLLRETSLASLGTFHERQGEQRILAGQGGVRAAW
ARLVGQSHEQYWEGDAQPGFDGDIQGVQAGLDLYANAGDAHRDQFGVFVGRTRAQGNVNG
FAIGWENVAVGRTRLDDKHVGLYWTRAGSAGGYLDVVVMQSRYDGEATSARGIGIDVDGD
GTTASVEVGKPLLRFGQSAWWLEPQLQVIWQRTSVDDAADRIAQLRFNADNAWTGRAGVR
LAADYEIAGNGWQPYFKLNYWQTLDGEDRIDFDTNPIINRQDSRALEVGFGVVARFNANV
SAFAVADYTRDLESSRQKERKVIEGNIGLRFDF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccatgaatgcgactccgccacgttcccgtctggcggcaggcatcgcgcgcagc
ctgcgcgtggcctgcggcggcctcctcctcgccaccaccaccgcgccggcctgggccggg
tgcgacagcacctcacccacgaccggacagaccgttacctgcacggcagcggcaccgagt
ccgcagaccacgcccattgccagcgtgccgggctcgagcaatgtcaccgtcaacgtgcag
gccggcgcccagctcggcatcgccagtggtgctgcgatcgcgctggacggcggcagcggt
caccgcatcgacaacagtggcagcatcaccagcgccagtggcgtgggaatcctcaccaac
gcggcgaccacggtggtgaaccgcggcgtcatcagcggcagcaccgccggcatcatcttt
ggcgccggcgccgaccgcctggacatgcttggcggcagcatcagcagcagcgtcctgcag
ggcgcgggcaacgatgccatcaccctcagtggcggcaccgtcggcagcatcgaccagggc
gccgacgcggacagcctggaggtctcgggcggcaccgtgtccggcaccgtgcagcagggc
tcgggcatcgataccttcctgatgaccggcggcagcatcggcgcactgctgcagggcgat
ggccttgaccgtttccgcatgaccgacgggcgcatcgtcggcgcgttcgatgatggcgat
tacggcgaaatgaccggcggccgcatcggccgggtcaacatgaagctggaagacaacacc
ttcctgatgtccggtggcaccatcgacggcaacctggttaccggcttcggcaacgacacg
atcgtgctctccgatggatacatcggcggcaacatcagcgtcagcggcggcaatgattcg
gtcaccatcaccggcggcaccgtgcgcggcgagatccgcctcagctttggcgacgaccgc
ttcgactggcgtggtggcggcgtggtgcacggcctggtcgatttcggggaaggcaacgac
accgccacgctggccgacctcaacgtctcttaccttggcgcgctgccgggctttgacggc
ggcctgggcactgacacgctcaacatggacaacgtcaagaccgatggcgtggcccgcttc
accggctgggaatcgatgacgctggccaatgacagccagctgaccttcgacggcgacctg
cgcctgggcgataccggaagcggtaccggcgcgctcgacgtggacgcgaccagcacgctg
ttcggcgggggcgtcaacgccagcattgtcgccttcaacgcagcactgccggtcaacgtc
accaatgccggccgcatcgacctgaccaacggcggtggcggcgccggcgatgcgttcacc
atcgccggcaattacaccggcaatggcggtgcgctgtacctggacaccgtgctgggtgcc
gacgccgccgcatcggaccggctggtgatctccaatggcgtggccagcgggaccacgggg
gtgggcatcctcaacgcgggcggtgccggtgccgaaaccgtggccgacggcatcctcgtg
gtgcaggcgatcaacggtgccagcaccagcccgggcgcgttcgcgctgtatgcaccggtt
gccgccggtgcgtacgagtatttcctgttcaagggtggcgtcagcgcagggagcagcgag
aactggtatctgcgttcgaccgtagtcaacggtgtggtcgccgcgccggccccaccgccc
atcggtctgggctcggtgacacctgagccaccgccgccggaggcgttggggacgccgccg
cctgcgctgccgccgcccccctcaccggacgtcccggaaaacccggacccggtcgccgcc
gagcccgcgccgccgccggagccggccccaccaccgccagccgcgccgccgcaggacgac
gtgccgccgccggtgccgaccgaagtggccgccgttcccgggccgttggcggagccgccc
acgcctgacgcgcgtccatcggaagaggccatcgtgccgttgtaccggctggaaaccggc
ctctactcggtggtgccgcccctgctgcgcgaaaccagcctggccagcctgggtaccttc
cacgagcgccagggtgagcagcgcatcctcgccggccagggcggcgtgcgggccgcatgg
gcgcgcctggtcgggcagagccacgagcagtactgggagggcgatgcccagcccggattc
gatggcgacatccagggggtacaggcaggtctggacctgtatgcgaacgcaggcgatgcg
caccgcgaccagttcggcgtgttcgtcggccgtacccgcgcgcagggcaacgtcaacggc
tttgcgatcggctgggaaaatgtcgcggtggggcgcacccgcctggacgacaagcacgtg
ggcctgtactggacacgtgccggcagcgccggcggctacctcgacgtggtggtgatgcag
agccgctacgacggcgaggcgacctccgcacgcggcatcggcatcgacgtggacggcgat
ggcaccaccgcatcggtggaagtgggcaagcctttgttgcgcttcggccagtcggcctgg
tggctggagccgcaactgcaggtgatctggcagcgcacctcggtggacgatgccgccgac
cgcatcgcgcagcttcgcttcaacgccgacaacgcctggaccgggcgcgccggcgtacgc
ctggctgcggactacgagatcgccggcaacggctggcaaccgtacttcaagctcaactac
tggcagacgctcgatggggaagaccgcatcgacttcgataccaaccccatcatcaaccgg
caggattcacgcgcgctggaggtcgggttcggcgtggtggcgcgcttcaatgccaacgtc
agcgcgttcgcggtcgccgactacacccgcgacctggaaagcagccggcagaaggagcgc
aaggtgatcgagggcaacatcgggctgcgtttcgacttctag
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