Stenotrophomonas rhizophila: BAY15_3222
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Entry
BAY15_3222 CDS
T04500
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh00300
Lysine biosynthesis
srh00470
D-Amino acid metabolism
srh01100
Metabolic pathways
srh01110
Biosynthesis of secondary metabolites
srh01120
Microbial metabolism in diverse environments
srh01230
Biosynthesis of amino acids
Module
srh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAY15_3222
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BAY15_3222
Enzymes [BR:
srh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BAY15_3222
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Paralog
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Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AOA73654
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Position
complement(3699087..3699938)
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AA seq
283 aa
AA seq
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MSKAASTALRFSKMHGAGNDFVVLDLRDGTPAPTPALAAQLANRHTGVGCDQILTIESPR
ADGSVAAYRIWNSDGSQSEQCGNGARCVAAWLVRDGAAQGERFNIDSPLATHAIERIGAD
HYAVAMGVPRFEPDQVPLLGFARAREEYLLPLQGDTVRFGAVSMGNPHAVIEVGLVDAAP
VERLGPLLQQHATFPQSVNVGFVQVIDPQHARLRVFERGVGETLACGSGACAAAVVMMQR
GRLQRDATVSLPGGDLRLRWPADDAQVVMSGPAAFVFEGEWNA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccgcctccaccgcgctgcgcttcagcaagatgcacggcgcgggtaacgac
ttcgtcgtgctcgacctgcgcgacggtaccccggcacccaccccggcattggcggcccag
ctggccaaccgccacaccggcgtcggttgcgaccagatcctgaccatcgaatcgccgcgc
gcggacggctcggttgcggcctaccgcatctggaattcggacggctcgcagtccgaacag
tgcggcaacggcgcgcgctgcgtcgcggcctggctggtccgtgatggtgcggcgcagggc
gaacgtttcaacatcgacagcccgctggccacccacgccattgaacgtatcggcgccgat
cactacgcggtggccatgggcgtgccgcgcttcgaaccggaccaggtgccgttgctgggc
tttgcccgtgcgcgcgaggaatacctgctgccgctgcagggcgataccgtgcgctttggc
gcggtctccatgggcaacccgcatgccgtgatcgaagtcggcctggtcgacgccgcaccg
gtcgaacggctgggccccctgctgcagcagcacgcgaccttcccgcagtcggtcaatgtc
ggcttcgtgcaggtgatcgatccgcagcatgcgcgcctgcgcgtgttcgaacgcggcgtc
ggcgaaacgctggcctgcggcagtggcgcctgcgccgccgccgtggtgatgatgcagcgc
ggccgcctgcagcgtgacgccacggtgtcgctgccggggggcgacctgcgcctgcgttgg
ccggccgacgacgcccaggtggtgatgtccggaccggccgcattcgtcttcgaaggggag
tggaacgcatga
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