Sulfitobacter rhodophyticola: AB4X18_05880
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Entry
AB4X18_05880 CDS
T11366
Name
(GenBank) tandem-95 repeat protein
Organism
srhd Sulfitobacter rhodophyticola
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_5
Big_9
Cadherin_4
Hint_2
HemolysinCabind
CshA_repeat
HYR
Glyco_hydro2_C5
Motif
Other DBs
NCBI-ProteinID:
XED05370
LinkDB
All DBs
Position
complement(3717979..3721236)
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AA seq
1085 aa
AA seq
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MIRTLDFNAFAAGTVVDTEYADEGVTISATGGSGKAMIFDSANPTGGDNDLASDTLGGLL
IISEDGDSSDPDDNWCGGTIAFDFDGPVRIKKLTFKDIEETSGEGTYVRFLDDEGNVIDE
QFIGPTRDGGESTVQFDVPGTSRFEVVFSGSGAIDNLVFEDNSAPDAVDDCAVTDEDTAV
IIPVLDNDTDPNGDVLTVTEATSPDGTVEITPEGALIFTPAENFNGNTSITYSVDDGNGG
TDTATVSVIVNPINDAPDAVDDADSTDEDTAITVDLLANDADVDGDPMSVVAATVPAEQG
TLVDNGDGTVTFTPAPDFAGEATISYTIEDPEGLQDSALHTITVVPVDDAPVAEDDAAET
DEDTPVTVDVLANDSDPDGDPLTVTEATSPDGTVEITPEGLVFTPAENFNGPTTISYTVQ
DPDGNEDTATVAVNVVPVNDAPDAVDDSDETPFETAVTVDLLANDSDVDGDDLSVIEATV
PGEQGTLVNNGDGTVTFTPAAGFAGTATIAYTIADEEGLTDSAIHTVTVADPVRDGFVDG
TDDGDLIDVDYLGDPDGDLIDAGDAILPGTEGDDDFVRAGDGDDTVIAGQGSDTVQGGEG
DDDITTGNGDLAPDLGYPEAATDTLGFDPDTDPEDDRDSVDGGAGNDTISTGDDRDTIDG
GTGEDVINAGIDDDIVDAGEGADRVVGGEGNDVIFGGAGDDTLYGGNDPDLGLDVLDIPD
EPTADNPFSPDRNPDNGRDTIEGGAGNDVIFGADDDDFLLGGTGDDTIDGQVDDDQIDGG
AGDDLLMGGQGDDTIEGGDGNDDIRGGEGDDVLFGDAGEDTFSDVNAGDEVDGGEGPVDN
DTLDLRGSAPAGGSLAVTYTSDDLEDGIVNYFDEDGNDAGSLVFEEIENVIPCFTPGTKI
ATPKGERLVEDLKVGDRIITRDNGMQEIRWIGARGMTGAEFEQAAHLKPVLIRQGALGND
LPERDMMVSPNHRVLIANDKTALFFEEREVLVAAKHLTHMEGIDVVDVSHTTYIHILFDH
HEVILSDGTWTESFQPGDMSLAGIGDAQRGEILELFPELATKQGIDGYTSARRSLKKHEA
KLLSK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaacacttgatttcaacgcatttgccgcaggcaccgttgtcgataccgaatat
gccgacgaaggtgtgaccatttccgcaaccggtggatccggcaaggcaatgatattcgac
agcgccaatcccacggggggtgacaatgatctggcgtcagacacgctgggtggtttgctg
atcatttcagaggatggagacagcagcgatcccgatgacaactggtgcggcggcacgatc
gcctttgatttcgacggccctgtgcgcatcaagaagctgaccttcaaagatatcgaggaa
acctccggcgaggggacctatgtgcgcttcctggatgatgaaggaaacgtcatcgacgaa
cagttcatcggcccgacccgcgatggtggcgaaagcacggtgcagttcgatgtgcctggc
accagccggttcgaagtggtcttcagcggctccggcgcgatcgacaatctggtcttcgaa
gacaacagtgcgcccgacgcggtcgatgattgcgcggtgaccgatgaagatactgccgtc
atcattccggttctcgacaacgacacggatcccaatggcgacgtgttgaccgtgacggag
gccacaagccccgacggcactgttgaaatcacgcccgaaggcgcgctgattttcacacct
gcggaaaatttcaacggcaacacctccatcacctatagcgtggatgacggcaacggcggc
accgatacggcgaccgtcagcgtgatcgtgaacccgatcaacgacgcgccggatgccgtc
gatgacgccgacagcaccgatgaagataccgcgatcaccgttgatctgctggccaatgat
gcggatgttgatggcgatcccatgagcgttgttgcggcgaccgtacctgcggaacagggc
acgctggtcgacaacggcgatggcacagtgaccttcacgcctgcgcctgattttgcggga
gaggcgacgatctcttacacgatcgaagacccggagggtctgcaggacagcgcccttcat
accattacggttgttccagtagatgacgcaccagttgctgaagatgatgcggccgagacg
gacgaagacacgcctgtcacagtggatgtgcttgccaacgacagcgaccctgatggtgat
ccgctgaccgtcaccgaagcgacaagccccgatggcacggttgagatcacgccagagggt
ctggtctttaccccagctgagaacttcaacgggccgaccacgatctcctacaccgtgcag
gacccggacgggaacgaggacacggcgactgtcgcggtcaatgtcgtaccggtgaacgac
gcgcccgatgcggtggatgattcggatgagacgcccttcgagacggcggtcacggtcgat
ctgctggccaatgacagcgatgtggatggcgatgatctgagcgtgatcgaagcgacggtg
cccggggaacaggggacgcttgtcaacaacggcgacggcacggtgacatttacgcctgcg
gcgggctttgccggcacggcgaccattgcctataccatcgccgatgaagagggtctgacc
gatagcgcgatccatacggtgaccgtggccgacccggtccgtgatggatttgtcgatggc
accgacgacggtgacctgatcgatgtggattaccttggtgatcctgacggagatctgatt
gacgccggtgatgcgatcctgccgggaaccgaaggggatgacgactttgtccgcgcgggc
gacggtgatgataccgtcattgccggacagggcagcgataccgttcagggtggcgaaggg
gatgacgacatcaccaccggtaacggcgatctggcccctgatctggggtacccggaagcg
gcgaccgatacgctgggctttgaccccgacaccgatcccgaagacgaccgggacagtgtc
gatggcggtgccgggaacgacacgatctccactggtgatgaccgcgacacgatcgatggc
ggcaccggcgaggatgtgatcaacgcagggatcgacgatgatatcgtcgatgcgggcgaa
ggcgcggaccgtgtcgtgggtggtgaaggcaacgacgtcatctttggcggcgcgggcgat
gatacgctttatggcggcaacgatcccgatcttggccttgatgtgctggacattccggac
gaacccacggcggacaatccgttctcccccgatcgcaaccctgacaatgggcgcgacacc
atcgaagggggtgccggcaacgatgtcatctttggtgccgacgacgatgacttcctgctc
gggggtaccggtgacgacaccattgacggtcaggtcgacgacgaccagatcgatggtggt
gccggtgacgatcttttgatggggggtcagggtgatgacaccatcgaagggggtgacggc
aacgacgatattcgcggtggcgaaggcgacgacgttctgttcggcgacgcgggcgaagat
acgttctcggacgtgaacgccggtgatgaagtcgacggcggcgaaggccctgtggacaac
gacacgcttgatctgcgcggttctgcccctgcgggcggcagccttgcggtgacctatacc
tcggatgatctggaagatggcatcgtcaactacttcgacgaagacggcaatgatgcagga
tcgctggtgttcgaggagatcgagaatgtcattccctgtttcacgcccggcacaaagatt
gccaccccaaagggggagcgtctggtcgaagacctgaaggtcggcgaccggatcatcacc
cgcgacaacggtatgcaagaaattcgctggatcggtgcccggggcatgaccggcgcggag
ttcgagcaggccgcacacctcaaacccgtgctgatccgtcagggtgcgcttggcaatgac
ctgccggaacgggacatgatggtgtcacccaaccaccgggtgctgatcgccaacgacaag
acggcgctgttcttcgaagaacgcgaagtgctggtcgcggcaaagcacctgacacacatg
gaagggatcgatgttgttgatgtttcccacacgacctacatccacatcctgttcgatcac
cacgaggtcatcctttcggatggtacctggacggaaagcttccagcccggtgatatgtcg
ctggcaggtatcggtgacgcacagcgcggcgaaatcctggagctctttccggagcttgca
acgaaacagggcattgacggttacacgtccgcccggcgttctctcaagaagcacgaggcg
aaacttctttcgaagtaa
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