Sulfitobacter rhodophyticola: AB4X18_15620
Help
Entry
AB4X18_15620 CDS
T11366
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srhd Sulfitobacter rhodophyticola
Pathway
srhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB4X18_15620 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhd03019
]
AB4X18_15620 (pnp)
03016 Transfer RNA biogenesis [BR:
srhd03016
]
AB4X18_15620 (pnp)
Enzymes [BR:
srhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB4X18_15620 (pnp)
Messenger RNA biogenesis [BR:
srhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB4X18_15620 (pnp)
Transfer RNA biogenesis [BR:
srhd03016
]
Prokaryotic type
tRNA degradation factors
AB4X18_15620 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XED03508
LinkDB
All DBs
Position
complement(1626353..1628488)
Genome browser
AA seq
711 aa
AA seq
DB search
MFNVSTKSIEWGEETLTLETGKVARQADGSVIATLGETSVMANVTFARKQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAGCRVGFEDGEYILNPTVDDMQDLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVKFAHESIQPVIDLIIDLAEDAAKEPFDFQ
PVDYSDLSKAVAKAGEKEMRAAFAIADKQERTTAVAEARETIKAALSEEQLEDPNLGSAM
KGLEASILRGDVVKTGKRIDGRKTDEIRDIVSETGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGPPGRREVGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKTAVAGVAMGLILEDDGSYA
ILSDILGDEDHLGDMDFKVAGTKDGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MNKAITGAAEFSEHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIHAIVAEPEEGAVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKMVDQETGEEMKKEEKADG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgtatcaacaaaatcaattgagtggggcgaagaaacgctaacactcgaaacc
ggcaaggtggcccgtcaggcagacggatccgtgattgccacactgggcgaaaccagcgtg
atggcgaacgtgacgttcgcgcgcaagcaaaagcccggtcaggacttctttccgctgacc
gtccactaccaggaaaagtattatgccgcgggcaaggttcccggtggtttcttcaagcgc
gaagcgcgccccactgaaaaagagacgctgacagcccgcctgatcgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagtgctggtgatgtgcaccgtgctcagccac
gatctggtcaatgaccccgacatggtcgcgatgatcgcggcctccgccgcgctgaccatc
tcgggcgcgcccttcatgggtccgattgccggttgtcgtgtgggtttcgaggatggcgaa
tacatcctgaacccgacagttgacgacatgcaggacctgcgcctgaaccctgaccagcgc
cttgacctggtcgttgcaggtaccaaggacgccgtgatgatggtggaatccgaagcctac
gagctgacggaagaagaaatgctgggtgcggtgaaattcgcccatgaaagcatccagccc
gtgatcgacctgatcattgacctggccgaagacgccgcgaaagagccgtttgatttccag
ccggtcgactattccgacctgtccaaggccgtcgcgaaagccggtgaaaaggaaatgcgc
gccgccttcgcgattgccgacaagcaagagcgtacgacggccgtcgccgaggcccgtgaa
accatcaaggccgccctgagcgaagagcagcttgaagatccgaacctcggttccgcgatg
aaggggcttgaagcctccatcctgcgcggtgatgtggtcaagaccggcaagcgtatcgac
ggtcggaaaaccgacgaaatccgcgacatcgtgtccgagacaggtatcctgccccggacg
cacggctccgcgctgttcacccgtggtgaaacgcagggccttgtcgtgaccacgctgggc
accggcgatgatgagcaattcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcactacaacttccctccctattcggttggtgaagtgggtcgcgtgggccctcccggc
cgccgcgaagtgggtcacggcaagctcgcatggcgcgcccttcaggctgttctgcctgct
gccacggatttcccctacaccattcgcgtggtgtcggagatcactgaatccaacggctca
agctccatggcgtccgtatgtggcgggtcgctgtccatgatggacgcgggcgtaccgctc
aagaccgccgtggccggtgtggccatgggcctgatcctcgaagatgacggctcctacgcg
atcctgtccgacattctgggtgacgaagaccacctgggcgacatggacttcaaggtcgca
ggcaccaaggacggtatcacgtcgttgcagatggacatcaaggtcgcgggcatcacgccc
gagatcatggagaaggcgttggcgcaagccaaggacggccggatgcatatccttggtgag
atgaacaaggccatcaccggcgctgcggagttctctgagcacgcgccccggattgaaacc
atgcaggtgccaacggataaaatccgggaagtcatcggttcgggcggcaaggtcatccgc
gagatcgtggaagtctctggtgccaaagtagacatcaacgacgaaggcatcatcaagatc
gcatcgcccaatggcgacagcatcaagaaagcctacgacatgatccacgccatcgtggct
gagccggaagagggcgcagtctacaccggtacagtcgtcaagatcgtcgacttcggtgcc
ttcgtgaacttcttcggcaagcgggacggtctggtgcatgtgtcccagatcgaaaaccgc
cgcctgaaccatccttccgacgtgctgaaggaaggtcaggaagtgaaggtcaaactgctg
ggctttgatgaccgcggcaaggtgcgcctgtcgatgaaaatggtcgatcaggaaaccgga
gaagagatgaagaaggaagagaaagcggacggataa
DBGET
integrated database retrieval system
