Sphingomonas rhizophila: H9L12_00060
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Entry
H9L12_00060 CDS
T07014
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L12_00060 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_00060 (ruvB)
Enzymes [BR:
srhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L12_00060 (ruvB)
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L12_00060 (ruvB)
RecFOR pathway proteins
H9L12_00060 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
AAA_18
nSTAND3
Sigma54_activat
AAA_28
AAA_2
AAA_17
RNA_helicase
AAA_14
Rad17
TsaE
AAA_25
IstB_IS21
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QNN65102
UniProt:
A0A7G9SB77
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All DBs
Position
complement(8272..9315)
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AA seq
347 aa
AA seq
DB search
MATDPARLTTPERTAEDADAALRPKSLDEFVGQQAARENLRVFVNAARSRGEALDHVLFF
GPPGLGKTTLAGILAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLNPA
VEEVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRL
NFYTVAELEQVVRRASRLLGIDLTDDGAVEVARRSRGTPRIAGRLLRRVRDFAHAAGSDT
VDAAVADRALGRLEIDKLGLDAMDRRYLLMIAELYNGGPVGVETLAAGLSEPRDTIEDVI
EPYLIQLGLIARTARGRCLNGRGWTHLGLNPPSGSQSGLFDPEGGPK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccactgatcccgcccgactgaccacgccggaacgcaccgccgaggatgccgacgcg
gcgcttcggcccaagagcctggacgagttcgtcggccagcaggccgcgcgcgagaacctc
cgcgtgttcgtcaacgctgcccgttcgcgcggcgaggcgctggaccatgtgctgttcttc
gggccgccgggccttggcaagacgacgctggccgggattctcgcccgcgaaatgggcgtc
ggcttccgcgccacgtccggcccggtcatcgccaagtcgggcgaccttgccgccctgctg
accaatctcgaggacggcgatgtcctgttcatcgacgaaattcaccgcctcaatccagcg
gtcgaggaggtgctctacccggcgatggaggaccgcgcgctcgacctgatgatcggcgag
ggtccgtcggcccggtcggtccgcatcgacctgccccgattcaccttggtcggagcgacg
acgcgccagggcctgctgacgacgccgctccgcgaccgcttcggcattcccgtccgcctc
aacttctacaccgtcgcggaactggaacaggtcgttcgccgggcctcccgcctgctgggc
atcgatctgaccgacgacggcgcggtcgaggttgcccgccgaagccgcggcacgccgcgc
atcgccggccggctgttgcgacgggtgcgagacttcgcccatgccgcgggcagcgacacg
gtcgacgcggccgtcgccgaccgcgcgctcggccggctggaaatcgacaagctcggcctc
gacgcgatggaccggcgctatctgctgatgatcgcggaactctacaacggcggcccggtc
ggggtggagacgctggcggcggggctcagcgagccacgcgacacgatcgaggacgtcatc
gagccttatctcattcagctgggcctcatcgcccgcacggcacgagggcgctgcctcaac
ggccgcggctggacccatttgggtctgaacccaccgtcgggcagtcagtcgggcctgttc
gatccggagggtggaccgaaatga
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