Sphingomonas rhizophila: H9L12_02445
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Entry
H9L12_02445 CDS
T07014
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_02445
Enzymes [BR:
srhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H9L12_02445
DNA repair and recombination proteins [BR:
srhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H9L12_02445
Prokaryotic type
H9L12_02445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QNN65483
UniProt:
A0A7G9SCA8
LinkDB
All DBs
Position
508926..510269
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AA seq
447 aa
AA seq
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MSAPALLWFRRDLRIADHHALTAAAAAGRVVPLFVLDDDTPGEFRIGGAQRWWLHHSLAA
LNESIGGKLVLRRGRAADVVRAVAQEIGAAEVHATALYEPWERETEAALADLVTFHDGDT
LVPPDRVTTQGGSPFKVYGAFWRALTEQLPPEQALPAPDVQFVAGPGGDKLANWNLLPTK
PDWATGFGKEWTPGEAGALERLDEFVTEVAAYERRRDRPSEEGTSRLSPHLHWGEVSPRQ
VWDALHPRGGSKFLKELAWRDFARSAMLAQPDIGWSNGRAAMDRLPWRTGADAEADFAAW
TKGRTGYPIVDAGMRQLWATGWMHNRGRMIAASFLTKHLLIDWRRGAAWFWDTLIDADYG
NNSLNWQWIAGTGTASQMFNRIMAPLAQSEKFDAGDYIREWVPELAGLDDDMIHDPADDR
RGAYPPRLIGHREARDRALSALAKVRG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcccgcgctgctctggttccggcgcgacctgcggatcgccgaccatcacgcg
ctcaccgccgccgccgctgcgggcagggtcgtgccattgttcgtcctcgacgacgacacg
cccggcgagtttcgcatcggcggcgcgcagcggtggtggctccatcacagcctcgccgcg
ctgaacgagtccatcggcggcaagctggtgctgcggcggggcagggccgctgacgtggtt
cgggcagtagcgcaggaaatcggcgcggccgaggtgcatgccaccgcgctgtacgaaccg
tgggagcgggagaccgaggccgcgctggccgacctcgtcaccttccacgacggcgacacg
ctggtcccgcctgaccgggtgacgacgcaaggcggatcgccgttcaaggtctacggcgcg
ttctggcgcgcgctgaccgagcagcttccgcccgagcaggcgctgcccgcgcccgatgta
cagttcgtcgccggtccagggggagacaagctggcgaactggaacctgctgccgaccaag
cccgattgggcgaccggcttcggcaaggaatggacgccgggggaagcgggcgcgctcgag
cgccttgacgagttcgtcaccgaggtcgcggcctacgaacgccgccgcgaccggccgtcg
gaggaggggacgagccgcctgtcgccgcacctccattggggcgaggtatcgccgcgccag
gtgtgggacgcgcttcacccgcgcggcgggtccaaattcctcaaggaactggcgtggcgc
gactttgcccgatcggcgatgctggcccagcctgacatcggctggagcaatggccgcgcg
gcgatggaccgcctgccgtggcggaccggcgctgacgccgaggccgatttcgccgcgtgg
acgaaaggccgcaccggctatccgatcgtcgacgcgggcatgcggcaattgtgggcgacc
ggatggatgcacaaccgggggcggatgatcgcggcgagcttccttacaaagcacttgctg
atcgactggcggcgcggcgcggcctggttctgggacacgctgatcgatgccgattatggc
aacaacagcctcaactggcagtggatcgccggcaccggcactgccagccagatgttcaac
cggatcatggcgccgctcgcccagtcggagaagttcgacgccggcgattacatccgtgag
tgggtgccggaactggccggccttgatgacgacatgatccacgatccggccgacgaccgg
cgcggcgcctatccgccaaggctgatcggccaccgcgaagcgcgcgaccgggcgctgtcg
gcgcttgccaaggtccgcggctag
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