Sphingomonas rhizophila: H9L12_03180
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Entry
H9L12_03180 CDS
T07014
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhi02000
]
H9L12_03180
Transporters [BR:
srhi02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L12_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
QNN65595
UniProt:
A0A7G9SCM0
LinkDB
All DBs
Position
652283..656437
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AA seq
1384 aa
AA seq
DB search
MTEGDEPVAAIRRPSWPRRLLGELIALIVSLAILAMVGLVALDTAPGHRFLVDRIAGMET
ATGLKIRIGRIDGSLFGTSRLRNVQVSDPQGVFLSSPEIELEWAPLSWLYNSLHIDRIEA
DRVRLDRLPKLRPSTKKGPLLPGFDIHIGKLDIRRLEVGAAVSGRPQLGRVLGSADIRAG
RAMINLQGAMSGGDRLAILLDADPDRDRFDLELRASAPANGFLPALAGSKRPVEAVITGN
GGWTRWRGRAQLRLSGIEAAGLELVTESGRYRLSGLLRPAPFAGGKVRRLTAPTVRVTGN
AQLKDRQLKGQLTLASPAMRAVAAGTLDLAANAFRGASVGADLIQPRALFPNMSGRNVRL
LMTLDGPFATANYSYRLTSPQVAFDNTGFVDVRAEGRGRMAPWPMRVPLRLQARAITGIG
DVAGGILRNLSVEGMLAVTPQLVRGDNLALKSDKVAGKMALLVDLRTGRFDVTLSGGLKR
YLIPGIGLVDVLTDLRVVPGPNGKARVVGKAQAWVRRLDNSFSAGLMGGLPRLTTDLERG
ADGILRLRNLQLYSPTLRLSGQGYRRRDGTFHIEASGRQSQYGPVRMVLDGPIERPAVNL
LLDRPNDAMGIRAMRLLLKPTAAGFDYTASGQSRLGPFTSDGQIQLPKGSPAVIDVAALR
VAGTTATGRLRSDPGGFNGQLTLAGGGIDGRLLFAPQQGDQRIEAHLALANASLPGPTPI
TIGAGRIDGHVLLAEGQTAIDGTLTARGLKYGTVSLARLTANAKLVNGSGEVRAALAGRR
GNAFEFVTLARITPDSIGLTGRGTIDRRPLMIDGTMNVRRDGDAWVVAPTRVRFGGGVGT
LSGRTGAQPALRADISSMPLQLLDIFWPKLGLAGVASGTVDYRFDGNRPSGRADLKVRGL
SRAGLVLTSQPIDLGFAGVLDGGKAGFRAVAVSGGKTIGRAQGRFAPLGAGPTVAALLNA
PMLMQVRYAGPADTLWRLSGVEVFDLSGPIAIGADIGGRMIDPQIRGSLRAQGARIESAV
TGTVITGLTARGRFAGPRLTLDQISGATPGGGSLAGRGSVDFSGGMAAFDLAFQTQNARV
LDRDDLAANVTGPLRIKSDGNGGVISGDLRLVSGRFTLGQASAAAKVPQLKVREINLDPA
EVIEVRQLSPWRLDVKVAGELNVRGLGIDSRWRTNLQIGGNVASPAATGTANLVRGNYEF
AGRVFRLDRGVIRFRGESPPDPLLDIRAEAQVQGVDASVLVRGTGLKPEISFASVPALPQ
DELLSRLLFGTSITNLSAPEALQLASAVAALNSGTGSLDPINAVRRAVGLDRLRILPADI
ATGQKTAISAGKYIGRKLFVEVITDGQGYSATRVEYQVTRWLSLLSSVSTIGRTSANVRI
SKDY
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggggacgaaccagtcgcagcgatccgccgcccgtcgtggccccgccgcctg
ctcggcgagttgattgcactgatcgtgtcgctggccattctggcgatggttggcctcgtc
gcgctcgacacggcgccgggtcatcgcttcctggtcgaccgcatcgcgggtatggagacg
gcgaccgggctcaagatccggattggccggatcgacgggtcgttgttcggcacgtcccgc
ctcagaaacgtgcaggtatcggatccgcaaggcgtcttcctgtcgagcccggagatcgag
ctcgaatgggcaccgctctcctggctctacaacagccttcacatcgaccgcatcgaagcc
gaccgggttcggctcgatcgcctgcccaagctgcggccgagcacgaagaagggaccgctg
cttccgggcttcgacattcacatcggcaagctcgatatccggcggctggaggtcggcgcc
gcggtcagcggacgaccgcagttggggcgcgtactgggcagtgccgacattcgcgcgggc
cgggcgatgatcaatctgcagggagcgatgagcgggggtgaccggctcgccatcctgctt
gacgcggaccccgaccgcgaccggttcgacctagagcttcgggcaagcgctccagccaac
ggcttcctgccggcgctggccggatcgaagcggccggtcgaggcggtgatcaccggcaat
ggcggctggacccgctggcgcggaagggcgcaattgcgtctgtcggggatcgaagcggcc
gggctggagctcgtcacggaatcgggcagataccgcctgtccggactgcttcgtccagcg
cctttcgccggtgggaaggtgcggcgactgaccgcgccaacggttcgggtaaccggcaat
gcccagctcaaggatcgccaactcaaggggcagctgaccctggcctcgccggcgatgcgc
gcggtggcggcgggaacgctcgaccttgctgcaaacgcctttcgcggcgccagcgtcggc
gctgacctgatccagccgcgcgcgctgttcccgaacatgagcgggcggaatgtgcgcctg
ctgatgacgctcgacggaccgttcgcgacggccaactattcctatcgcctgaccagtccg
caggtcgcgttcgacaataccggctttgtcgatgtgcgcgccgagggacggggaagaatg
gcgccgtggccgatgcgggtgccacttcgcctgcaggcgcgggcgatcaccgggatcggc
gacgtggccggcgggatccttcgcaacttgtcggtcgagggcatgctcgcggtgacgccc
cagctagtgcgcggtgataatctggcgctgaagagcgacaaggtcgcgggcaagatggcg
ctgctcgtcgacctgcgcaccggccggttcgacgtcaccttgtcgggcggtctgaagcgc
tacctcatcccaggcatcggcctggtcgatgtgctgaccgaccttcgcgtggtgcccgga
cccaacggcaaggcgcgtgtggtgggcaaggcgcaggcgtgggtccggcggctcgacaat
agcttctccgccgggctgatgggcggactgccccgcctgacgaccgacctggagcggggt
gccgacggcattctgcgcctccgcaatctgcagctctactctccgacgttgaggctgtcc
ggccaaggctatcgccgccgcgatggcaccttccacatcgaggcgagcggacggcagtcg
cagtacgggccggtgcggatggtgctcgatggaccaatcgagcggccggcggttaacctt
ctgctcgaccggcccaacgacgcgatgggcattcgcgccatgcggctgctgctcaagccg
acggcggcgggcttcgactacacggcatccggccagtcgcggctgggcccgttcacgtcg
gacgggcaaatccagctgcccaagggatcgccggcggtcatcgatgttgccgcgctccgc
gtagccggaacgaccgcaacggggcggttgcgcagcgatcccggcggcttcaacggccag
ttgacgctggccggcggcgggatcgacgggcggctgctgtttgcgccgcagcagggggac
cagcggatcgaagcgcatttggcgctggccaacgccagcctgccgggtccgacgccgatc
acgatcggtgcggggcggatcgacgggcatgtcctgcttgccgaagggcagacggccatc
gacggaacgttgacggcccgcggcctgaagtacggcaccgtcagcctggcgcggctgacc
gccaacgccaagctggtcaacggatcgggcgaggtccgcgccgcgctggcgggacgaagg
ggcaacgccttcgagttcgtcacgttggcgcggattacgcccgacagcatagggctgacc
gggcgcgggacgatcgaccggcggcctctcatgatcgacgggacgatgaacgttcgccgc
gacggggatgcctgggtggtcgcgcccacgcgagtgcgtttcggtggcggggtcgggacg
ctatcgggacggaccggagcgcagcctgcgcttcgcgccgacatttcgtcgatgccgctg
cagctgctggatatcttctggcccaagctcgggcttgccggggtcgccagcggcacggtc
gattaccggtttgacggcaaccgcccgagcggccgcgccgacctcaaggttcgggggctg
agccgcgccggcctggtgctgacatcgcaaccgatcgaccttggcttcgccggggtactc
gacggcggcaaggccggcttccgcgcggtcgcggtatccggcggcaagaccatcggccgg
gcgcaggggcggttcgcgccgctgggtgcggggccgaccgtcgcggcgctgctcaacgcg
ccgatgctgatgcaggtgcgctacgccgggccggccgatacgctgtggcgcctgtcgggg
gtcgaagtgttcgacctgtccgggcccatcgcgatcggcgcggatatcggtggacggatg
atcgatccgcagatccgcgggtcgcttcgcgcacagggcgcccggatcgagagcgccgtg
accggcacggtcatcacaggtcttaccgctcgcggtcgcttcgccggaccgcggctgacg
ctcgaccagatcagcggggccacgccgggcggaggatcgctggccggccgcggctcggtg
gacttctcgggcggcatggcggcgttcgatctcgccttccagacgcagaatgcgcgggtt
ctcgaccgtgacgatctggccgccaacgtcaccgggccgctccgcatcaaatccgacggg
aacggcggggtcatttccggcgacctgcggctcgtgtccggacgcttcacgctgggccag
gccagcgccgcggccaaggtgccgcaattgaaggttcgcgagatcaacctcgatccggcc
gaggtgatcgaggtccgccaattgtcgccgtggcggctcgacgtgaaggtcgccggtgaa
ctcaacgttcgcgggctcggcatcgacagccgctggcggaccaatctgcagatcggcggc
aacgttgcctcgcccgccgcgaccggcacggcgaacctggtgcgcggaaattacgaattc
gcaggccgggtcttccggctcgatcgcggcgtcatccgcttccgcggtgaaagcccaccc
gatccgctgctcgacattcgggccgaggcgcaagtccagggcgttgacgcatcggtgctg
gttcgcgggacgggcctcaagccggaaatcagcttcgcttcggtcccggcgctgccgcag
gacgagttgttgtcgcgcctgttgttcgggacatcgatcaccaacctgtcggcacccgaa
gcgctgcagcttgcgagtgccgtggccgccctcaatagcggtaccggcagcctggacccg
atcaacgccgtacggcgcgcggtcgggctggaccggctgcgcatcctgccggcggacatc
gcgaccgggcagaagacagccatctccgccggcaaatatatcggccgcaagctgttcgtg
gaggtgattaccgacggccagggctattcagccacgcgggtcgaatatcaggtcacgcgc
tggctctcgctgctgtcatcggtttcgacgattggacggacgagcgccaacgtccgtatt
tcaaaggattattga
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