Sphingomonas rhizophila: H9L12_05445
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Entry
H9L12_05445 CDS
T07014
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H9L12_05445 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srhi01007
]
H9L12_05445 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srhi03016
]
H9L12_05445 (aspS)
03029 Mitochondrial biogenesis [BR:
srhi03029
]
H9L12_05445 (aspS)
Enzymes [BR:
srhi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
H9L12_05445 (aspS)
Amino acid related enzymes [BR:
srhi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H9L12_05445 (aspS)
Transfer RNA biogenesis [BR:
srhi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H9L12_05445 (aspS)
Prokaryotic type
Other AARSs
H9L12_05445 (aspS)
Mitochondrial biogenesis [BR:
srhi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
H9L12_05445 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QNN65955
UniProt:
A0A7G9SDN0
LinkDB
All DBs
Position
complement(1101880..1103667)
Genome browser
AA seq
595 aa
AA seq
DB search
MHAYRTHTCADLRATDVGSSVKLSGWIHRKRDHGGVLFIDLRDHYGLTQVVAAAGSDALK
LLDSLRAESVVTITGDVVAREGGAVNAKLATGDIEVIARQVEVQSSAAELPMPVAGEQDY
PEEIRLKYRYLDLRRERLHANILLRSKVIASIRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFAAIEPVLSGVFAEFAGERSVTPAGEYPRIAYKDAILKYGSDKPDLRNPIL
IHDVGDHFAGSGFGLFAGMVDKGMKVRALAAPGTAEKSRKFFDDMNEWARGEGFAGLGYA
TRKGGEWGGPIAKNHGSEGMDRIAEAMGLGPDDGIFFAAGKEADAAKLAGLARTRVAEQL
DLIEKGAFRFCWIVDFPMFEYNDDQKKIDFSHNPFSMPQGGMEALEGKDPLDILAWQYDI
VCNGVELSSGAIRNHRPDIMYKAFEIAGYTREEVDTNFPGMIGAFKYGAPPHGGSAPGID
RIVMLLADEPNIREVIVFPMNQKAEDLLMNAPAEVTSKQLKELSIRIVADGAPKP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctaccgtacgcacacttgcgctgacctgcgcgccaccgatgtcggctcgtcc
gtcaagctgtcgggctggatccatcgcaagcgcgaccatggcggcgttttgttcatcgac
cttcgtgaccactacgggctcacccaggtcgtggcggcggcggggagcgatgcgcttaag
ctgctcgattcgctgcgtgccgaatcggtggtgacgattacgggcgacgtcgtcgctcgc
gagggcggggcggtgaatgccaagctggcgaccggggacatcgaagtcatcgctcgccag
gtcgaagtccagtcgtccgccgccgaactgccgatgccggtagccggagagcaggactat
cccgaggaaatccgcctcaagtaccgctacctcgaccttcggcgggagcggctgcacgcc
aacatcctgctgcggtcaaaggtgatcgcctcgatccgccgccggatgatcgaccagggc
ttcaccgagttccagactccgatcctgaccgcgtcgtcgccggaaggtgcgcgcgactat
ctagtcccgagccgggttcatccgggcaagttctacgcgctcccgcaggcgccgcagatg
ttcaagcagttgctgatggtcgccggcttcgaccgctatttccagatcgccccctgcttc
cgcgacgaggacgctcgcgccgaccgcagcccgggcgaattctaccagcttgatttcgag
atgagcttcgtcactcaggacgacgtcttcgcggcgatcgagccggtcctctcgggcgtg
ttcgccgaattcgccggtgagcggtcggtgactccggcgggtgaatatccgcgcattgcc
tacaaggacgcgatcctgaagtatggcagcgacaagccggaccttcgcaaccccatcctg
attcacgacgttggcgaccatttcgccgggtcgggctttgggctgttcgcgggtatggtc
gacaagggcatgaaggttcgcgcgcttgcggcgccgggcaccgccgagaagagccggaag
ttcttcgatgacatgaacgagtgggcgcgcggagaagggttcgccgggctcggttacgcc
acccgcaagggcggggagtggggcggtccgatcgccaagaatcacggcagcgaaggcatg
gaccggatcgccgaggcgatgggccttggtccggacgacggcatcttcttcgccgccggc
aaggaagcagacgcggccaagctggcaggcctggcgcgcacccgggtcgccgaacaactc
gacctgatcgagaagggcgcgttccgattctgctggatcgtcgactttccgatgttcgaa
tataatgacgatcagaagaagatcgacttcagccacaatcctttctcgatgccgcagggc
gggatggaggcgctagagggcaaggacccgctcgatattctggcgtggcagtacgacatc
gtctgcaacggcgtggaactgagctcgggcgcgatccgtaaccaccgcccggacatcatg
tacaaggcgttcgagatcgccggctacacgcgcgaggaagtcgacaccaacttcccaggc
atgatcggcgcgttcaaatatggcgccccgccgcacggcggttcggcgcccggcatcgac
cggatcgtgatgctattggccgatgagccgaacattcgcgaggtcatcgtcttcccgatg
aaccagaaggcggaggaccttctgatgaacgcgcccgccgaggttacgtcgaagcagctg
aaggaattgtcgatccgcatcgtcgccgacggcgcgcccaagccctga
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